Gene : Lsat_1_v5_gn_8_78180 L. sativa V8
Defline:  (1 of 102) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2457
Name:  ? Lsat_1_v5_gn_8_78180 Secondary Identifier:  ? PAC:38954994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_78180 0.5kb upstream 0.5kb upstream 991   true Lsat_1_v8_lg_8: 114646742-114647732 Lactuca sativa
Lsat_1_v5_gn_8_78180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 114646742-114647241 Lactuca sativa
Lsat_1_v5_gn_8_78180 0.5kb downstream 0.5kb downstream 991   true Lsat_1_v8_lg_8: 114647242-114648232 Lactuca sativa
Lsat_1_v5_gn_8_78180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 114647733-114648232 Lactuca sativa
Lsat_1_v5_gn_8_78180 1.0kb upstream 1.0kb upstream 1491   true Lsat_1_v8_lg_8: 114646242-114647732 Lactuca sativa
Lsat_1_v5_gn_8_78180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 114646242-114647241 Lactuca sativa
Lsat_1_v5_gn_8_78180 1.0kb downstream 1.0kb downstream 1491   true Lsat_1_v8_lg_8: 114647242-114648732 Lactuca sativa
Lsat_1_v5_gn_8_78180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 114647733-114648732 Lactuca sativa
Lsat_1_v5_gn_8_78180 2.0kb upstream 2.0kb upstream 2491   true Lsat_1_v8_lg_8: 114645242-114647732 Lactuca sativa
Lsat_1_v5_gn_8_78180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 114645242-114647241 Lactuca sativa
Lsat_1_v5_gn_8_78180 2.0kb downstream 2.0kb downstream 2491   true Lsat_1_v8_lg_8: 114647242-114649732 Lactuca sativa
Lsat_1_v5_gn_8_78180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 114647733-114649732 Lactuca sativa
Lsat_1_v5_gn_8_78180 5.0kb upstream 5.0kb upstream 5491   true Lsat_1_v8_lg_8: 114642242-114647732 Lactuca sativa
Lsat_1_v5_gn_8_78180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 114642242-114647241 Lactuca sativa
Lsat_1_v5_gn_8_78180 5.0kb downstream 5.0kb downstream 5491   true Lsat_1_v8_lg_8: 114647242-114652732 Lactuca sativa
Lsat_1_v5_gn_8_78180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 114647733-114652732 Lactuca sativa
Lsat_1_v5_gn_8_78180 10.0kb upstream 10.0kb upstream 10491   true Lsat_1_v8_lg_8: 114637242-114647732 Lactuca sativa
Lsat_1_v5_gn_8_78180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 114637242-114647241 Lactuca sativa
Lsat_1_v5_gn_8_78180 10.0kb downstream 10.0kb downstream 10491   true Lsat_1_v8_lg_8: 114647242-114657732 Lactuca sativa
Lsat_1_v5_gn_8_78180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 114647733-114657732 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479881 5263 Asterids View MSA
123749819 5271 Pentapetalae View MSA
122788630 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain