Gene : Lsat_1_v5_gn_8_77340 L. sativa V8
Defline:  (1 of 1) PTHR18952//PTHR18952:SF129 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Genomic Order:  2406
Name:  ? Lsat_1_v5_gn_8_77340 Secondary Identifier:  ? PAC:38954569
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CYANCAT-PWY Lactuca sativa pathologic  
Lsativa PWY-241 Lactuca sativa pathologic  
Lsativa PWY-7115 Lactuca sativa pathologic  
Lsativa PWY-7117 Lactuca sativa pathologic  
Lsativa PWYQT-4429 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_77340 0.5kb upstream 0.5kb upstream 3483   true Lsat_1_v8_lg_8: 113206789-113210271 Lactuca sativa
Lsat_1_v5_gn_8_77340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 113209772-113210271 Lactuca sativa
Lsat_1_v5_gn_8_77340 0.5kb downstream 0.5kb downstream 3483   true Lsat_1_v8_lg_8: 113206289-113209771 Lactuca sativa
Lsat_1_v5_gn_8_77340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 113206289-113206788 Lactuca sativa
Lsat_1_v5_gn_8_77340 1.0kb upstream 1.0kb upstream 3983   true Lsat_1_v8_lg_8: 113206789-113210771 Lactuca sativa
Lsat_1_v5_gn_8_77340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 113209772-113210771 Lactuca sativa
Lsat_1_v5_gn_8_77340 1.0kb downstream 1.0kb downstream 3983   true Lsat_1_v8_lg_8: 113205789-113209771 Lactuca sativa
Lsat_1_v5_gn_8_77340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 113205789-113206788 Lactuca sativa
Lsat_1_v5_gn_8_77340 2.0kb upstream 2.0kb upstream 4983   true Lsat_1_v8_lg_8: 113206789-113211771 Lactuca sativa
Lsat_1_v5_gn_8_77340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 113209772-113211771 Lactuca sativa
Lsat_1_v5_gn_8_77340 2.0kb downstream 2.0kb downstream 4983   true Lsat_1_v8_lg_8: 113204789-113209771 Lactuca sativa
Lsat_1_v5_gn_8_77340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 113204789-113206788 Lactuca sativa
Lsat_1_v5_gn_8_77340 5.0kb upstream 5.0kb upstream 7983   true Lsat_1_v8_lg_8: 113206789-113214771 Lactuca sativa
Lsat_1_v5_gn_8_77340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 113209772-113214771 Lactuca sativa
Lsat_1_v5_gn_8_77340 5.0kb downstream 5.0kb downstream 7983   true Lsat_1_v8_lg_8: 113201789-113209771 Lactuca sativa
Lsat_1_v5_gn_8_77340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 113201789-113206788 Lactuca sativa
Lsat_1_v5_gn_8_77340 10.0kb upstream 10.0kb upstream 12983   true Lsat_1_v8_lg_8: 113206789-113219771 Lactuca sativa
Lsat_1_v5_gn_8_77340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 113209772-113219771 Lactuca sativa
Lsat_1_v5_gn_8_77340 10.0kb downstream 10.0kb downstream 12983   true Lsat_1_v8_lg_8: 113196789-113209771 Lactuca sativa
Lsat_1_v5_gn_8_77340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 113196789-113206788 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478717 5263 Asterids View MSA
123746291 5271 Pentapetalae View MSA
122797456 5272 Eudicot View MSA
122049694 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain