Gene : Lsat_1_v5_gn_8_80560 L. sativa V8
Defline:  (1 of 2) PTHR27002//PTHR27002:SF42 - FAMILY NOT NAMED // G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 Genomic Order:  2492
Name:  ? Lsat_1_v5_gn_8_80560 Secondary Identifier:  ? PAC:38951139
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_80560 0.5kb upstream 0.5kb upstream 4215   true Lsat_1_v8_lg_8: 115964712-115968926 Lactuca sativa
Lsat_1_v5_gn_8_80560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 115968427-115968926 Lactuca sativa
Lsat_1_v5_gn_8_80560 0.5kb downstream 0.5kb downstream 4215   true Lsat_1_v8_lg_8: 115964212-115968426 Lactuca sativa
Lsat_1_v5_gn_8_80560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 115964212-115964711 Lactuca sativa
Lsat_1_v5_gn_8_80560 1.0kb upstream 1.0kb upstream 4715   true Lsat_1_v8_lg_8: 115964712-115969426 Lactuca sativa
Lsat_1_v5_gn_8_80560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 115968427-115969426 Lactuca sativa
Lsat_1_v5_gn_8_80560 1.0kb downstream 1.0kb downstream 4715   true Lsat_1_v8_lg_8: 115963712-115968426 Lactuca sativa
Lsat_1_v5_gn_8_80560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 115963712-115964711 Lactuca sativa
Lsat_1_v5_gn_8_80560 2.0kb upstream 2.0kb upstream 5715   true Lsat_1_v8_lg_8: 115964712-115970426 Lactuca sativa
Lsat_1_v5_gn_8_80560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 115968427-115970426 Lactuca sativa
Lsat_1_v5_gn_8_80560 2.0kb downstream 2.0kb downstream 5715   true Lsat_1_v8_lg_8: 115962712-115968426 Lactuca sativa
Lsat_1_v5_gn_8_80560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 115962712-115964711 Lactuca sativa
Lsat_1_v5_gn_8_80560 5.0kb upstream 5.0kb upstream 8715   true Lsat_1_v8_lg_8: 115964712-115973426 Lactuca sativa
Lsat_1_v5_gn_8_80560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 115968427-115973426 Lactuca sativa
Lsat_1_v5_gn_8_80560 5.0kb downstream 5.0kb downstream 8715   true Lsat_1_v8_lg_8: 115959712-115968426 Lactuca sativa
Lsat_1_v5_gn_8_80560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 115959712-115964711 Lactuca sativa
Lsat_1_v5_gn_8_80560 10.0kb upstream 10.0kb upstream 13715   true Lsat_1_v8_lg_8: 115964712-115978426 Lactuca sativa
Lsat_1_v5_gn_8_80560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 115968427-115978426 Lactuca sativa
Lsat_1_v5_gn_8_80560 10.0kb downstream 10.0kb downstream 13715   true Lsat_1_v8_lg_8: 115954712-115968426 Lactuca sativa
Lsat_1_v5_gn_8_80560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 115954712-115964711 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478262 5263 Asterids View MSA
123738478 5271 Pentapetalae View MSA
122790602 5272 Eudicot View MSA
122050029 5273 Angiosperm View MSA
121311695 5274 Embryophyte View MSA
123348958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain