Gene : Lsat_1_v5_gn_8_54041 L. sativa V8
Defline:  (1 of 11) PF13426 - PAS domain (PAS_9) Genomic Order:  1691
Name:  ? Lsat_1_v5_gn_8_54041 Secondary Identifier:  ? PAC:38951807
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_54041 0.5kb upstream 0.5kb upstream 3338   true Lsat_1_v8_lg_8: 75153672-75157009 Lactuca sativa
Lsat_1_v5_gn_8_54041 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 75156510-75157009 Lactuca sativa
Lsat_1_v5_gn_8_54041 0.5kb downstream 0.5kb downstream 3338   true Lsat_1_v8_lg_8: 75153172-75156509 Lactuca sativa
Lsat_1_v5_gn_8_54041 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 75153172-75153671 Lactuca sativa
Lsat_1_v5_gn_8_54041 1.0kb upstream 1.0kb upstream 3838   true Lsat_1_v8_lg_8: 75153672-75157509 Lactuca sativa
Lsat_1_v5_gn_8_54041 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 75156510-75157509 Lactuca sativa
Lsat_1_v5_gn_8_54041 1.0kb downstream 1.0kb downstream 3838   true Lsat_1_v8_lg_8: 75152672-75156509 Lactuca sativa
Lsat_1_v5_gn_8_54041 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 75152672-75153671 Lactuca sativa
Lsat_1_v5_gn_8_54041 2.0kb upstream 2.0kb upstream 4838   true Lsat_1_v8_lg_8: 75153672-75158509 Lactuca sativa
Lsat_1_v5_gn_8_54041 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 75156510-75158509 Lactuca sativa
Lsat_1_v5_gn_8_54041 2.0kb downstream 2.0kb downstream 4838   true Lsat_1_v8_lg_8: 75151672-75156509 Lactuca sativa
Lsat_1_v5_gn_8_54041 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 75151672-75153671 Lactuca sativa
Lsat_1_v5_gn_8_54041 5.0kb upstream 5.0kb upstream 7838   true Lsat_1_v8_lg_8: 75153672-75161509 Lactuca sativa
Lsat_1_v5_gn_8_54041 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 75156510-75161509 Lactuca sativa
Lsat_1_v5_gn_8_54041 5.0kb downstream 5.0kb downstream 7838   true Lsat_1_v8_lg_8: 75148672-75156509 Lactuca sativa
Lsat_1_v5_gn_8_54041 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 75148672-75153671 Lactuca sativa
Lsat_1_v5_gn_8_54041 10.0kb upstream 10.0kb upstream 12838   true Lsat_1_v8_lg_8: 75153672-75166509 Lactuca sativa
Lsat_1_v5_gn_8_54041 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 75156510-75166509 Lactuca sativa
Lsat_1_v5_gn_8_54041 10.0kb downstream 10.0kb downstream 12838   true Lsat_1_v8_lg_8: 75143672-75156509 Lactuca sativa
Lsat_1_v5_gn_8_54041 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 75143672-75153671 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473539 5263 Asterids View MSA
123740097 5271 Pentapetalae View MSA
122769970 5272 Eudicot View MSA
122045856 5273 Angiosperm View MSA
121348460 5274 Embryophyte View MSA
123424929 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain