Gene : Lsat_1_v5_gn_8_55901 L. sativa V8
Defline:  (1 of 21) PF00421 - Photosystem II protein (PSII) Genomic Order:  1761
Name:  ? Lsat_1_v5_gn_8_55901 Secondary Identifier:  ? PAC:38954398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_55901 0.5kb upstream 0.5kb upstream 764   true Lsat_1_v8_lg_8: 77878843-77879606 Lactuca sativa
Lsat_1_v5_gn_8_55901 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 77879107-77879606 Lactuca sativa
Lsat_1_v5_gn_8_55901 0.5kb downstream 0.5kb downstream 764   true Lsat_1_v8_lg_8: 77878343-77879106 Lactuca sativa
Lsat_1_v5_gn_8_55901 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 77878343-77878842 Lactuca sativa
Lsat_1_v5_gn_8_55901 1.0kb upstream 1.0kb upstream 1264   true Lsat_1_v8_lg_8: 77878843-77880106 Lactuca sativa
Lsat_1_v5_gn_8_55901 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 77879107-77880106 Lactuca sativa
Lsat_1_v5_gn_8_55901 1.0kb downstream 1.0kb downstream 1264   true Lsat_1_v8_lg_8: 77877843-77879106 Lactuca sativa
Lsat_1_v5_gn_8_55901 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 77877843-77878842 Lactuca sativa
Lsat_1_v5_gn_8_55901 2.0kb upstream 2.0kb upstream 2264   true Lsat_1_v8_lg_8: 77878843-77881106 Lactuca sativa
Lsat_1_v5_gn_8_55901 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 77879107-77881106 Lactuca sativa
Lsat_1_v5_gn_8_55901 2.0kb downstream 2.0kb downstream 2264   true Lsat_1_v8_lg_8: 77876843-77879106 Lactuca sativa
Lsat_1_v5_gn_8_55901 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 77876843-77878842 Lactuca sativa
Lsat_1_v5_gn_8_55901 5.0kb upstream 5.0kb upstream 5264   true Lsat_1_v8_lg_8: 77878843-77884106 Lactuca sativa
Lsat_1_v5_gn_8_55901 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 77879107-77884106 Lactuca sativa
Lsat_1_v5_gn_8_55901 5.0kb downstream 5.0kb downstream 5264   true Lsat_1_v8_lg_8: 77873843-77879106 Lactuca sativa
Lsat_1_v5_gn_8_55901 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 77873843-77878842 Lactuca sativa
Lsat_1_v5_gn_8_55901 10.0kb upstream 10.0kb upstream 10264   true Lsat_1_v8_lg_8: 77878843-77889106 Lactuca sativa
Lsat_1_v5_gn_8_55901 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 77879107-77889106 Lactuca sativa
Lsat_1_v5_gn_8_55901 10.0kb downstream 10.0kb downstream 10264   true Lsat_1_v8_lg_8: 77868843-77879106 Lactuca sativa
Lsat_1_v5_gn_8_55901 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 77868843-77878842 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481747 5263 Asterids View MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain