Gene : Lsat_1_v5_gn_8_63361 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1962
Name:  ? Lsat_1_v5_gn_8_63361 Secondary Identifier:  ? PAC:38956320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_63361 0.5kb upstream 0.5kb upstream 3074   true Lsat_1_v8_lg_8: 90795189-90798262 Lactuca sativa
Lsat_1_v5_gn_8_63361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 90797763-90798262 Lactuca sativa
Lsat_1_v5_gn_8_63361 0.5kb downstream 0.5kb downstream 3074   true Lsat_1_v8_lg_8: 90794689-90797762 Lactuca sativa
Lsat_1_v5_gn_8_63361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 90794689-90795188 Lactuca sativa
Lsat_1_v5_gn_8_63361 1.0kb upstream 1.0kb upstream 3574   true Lsat_1_v8_lg_8: 90795189-90798762 Lactuca sativa
Lsat_1_v5_gn_8_63361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 90797763-90798762 Lactuca sativa
Lsat_1_v5_gn_8_63361 1.0kb downstream 1.0kb downstream 3574   true Lsat_1_v8_lg_8: 90794189-90797762 Lactuca sativa
Lsat_1_v5_gn_8_63361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 90794189-90795188 Lactuca sativa
Lsat_1_v5_gn_8_63361 2.0kb upstream 2.0kb upstream 4574   true Lsat_1_v8_lg_8: 90795189-90799762 Lactuca sativa
Lsat_1_v5_gn_8_63361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 90797763-90799762 Lactuca sativa
Lsat_1_v5_gn_8_63361 2.0kb downstream 2.0kb downstream 4574   true Lsat_1_v8_lg_8: 90793189-90797762 Lactuca sativa
Lsat_1_v5_gn_8_63361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 90793189-90795188 Lactuca sativa
Lsat_1_v5_gn_8_63361 5.0kb upstream 5.0kb upstream 7574   true Lsat_1_v8_lg_8: 90795189-90802762 Lactuca sativa
Lsat_1_v5_gn_8_63361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 90797763-90802762 Lactuca sativa
Lsat_1_v5_gn_8_63361 5.0kb downstream 5.0kb downstream 7574   true Lsat_1_v8_lg_8: 90790189-90797762 Lactuca sativa
Lsat_1_v5_gn_8_63361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 90790189-90795188 Lactuca sativa
Lsat_1_v5_gn_8_63361 10.0kb upstream 10.0kb upstream 12574   true Lsat_1_v8_lg_8: 90795189-90807762 Lactuca sativa
Lsat_1_v5_gn_8_63361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 90797763-90807762 Lactuca sativa
Lsat_1_v5_gn_8_63361 10.0kb downstream 10.0kb downstream 12574   true Lsat_1_v8_lg_8: 90785189-90797762 Lactuca sativa
Lsat_1_v5_gn_8_63361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 90785189-90795188 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472345 5263 Asterids View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain