Gene : Lsat_1_v5_gn_0_5321 L. sativa V8
Defline:  (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC) Genomic Order:  3011
Name:  ? Lsat_1_v5_gn_0_5321 Secondary Identifier:  ? PAC:38924970
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_5321 0.5kb upstream 0.5kb upstream 2533   true Lsat_1_v8_lg_9: 150701409-150703941 Lactuca sativa
Lsat_1_v5_gn_0_5321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 150701409-150701908 Lactuca sativa
Lsat_1_v5_gn_0_5321 0.5kb downstream 0.5kb downstream 2533   true Lsat_1_v8_lg_9: 150701909-150704441 Lactuca sativa
Lsat_1_v5_gn_0_5321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 150703942-150704441 Lactuca sativa
Lsat_1_v5_gn_0_5321 1.0kb upstream 1.0kb upstream 3033   true Lsat_1_v8_lg_9: 150700909-150703941 Lactuca sativa
Lsat_1_v5_gn_0_5321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 150700909-150701908 Lactuca sativa
Lsat_1_v5_gn_0_5321 1.0kb downstream 1.0kb downstream 3033   true Lsat_1_v8_lg_9: 150701909-150704941 Lactuca sativa
Lsat_1_v5_gn_0_5321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 150703942-150704941 Lactuca sativa
Lsat_1_v5_gn_0_5321 2.0kb upstream 2.0kb upstream 4033   true Lsat_1_v8_lg_9: 150699909-150703941 Lactuca sativa
Lsat_1_v5_gn_0_5321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 150699909-150701908 Lactuca sativa
Lsat_1_v5_gn_0_5321 2.0kb downstream 2.0kb downstream 4033   true Lsat_1_v8_lg_9: 150701909-150705941 Lactuca sativa
Lsat_1_v5_gn_0_5321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 150703942-150705941 Lactuca sativa
Lsat_1_v5_gn_0_5321 5.0kb upstream 5.0kb upstream 7033   true Lsat_1_v8_lg_9: 150696909-150703941 Lactuca sativa
Lsat_1_v5_gn_0_5321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 150696909-150701908 Lactuca sativa
Lsat_1_v5_gn_0_5321 5.0kb downstream 5.0kb downstream 7033   true Lsat_1_v8_lg_9: 150701909-150708941 Lactuca sativa
Lsat_1_v5_gn_0_5321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 150703942-150708941 Lactuca sativa
Lsat_1_v5_gn_0_5321 10.0kb upstream 10.0kb upstream 12033   true Lsat_1_v8_lg_9: 150691909-150703941 Lactuca sativa
Lsat_1_v5_gn_0_5321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 150691909-150701908 Lactuca sativa
Lsat_1_v5_gn_0_5321 10.0kb downstream 10.0kb downstream 12033   true Lsat_1_v8_lg_9: 150701909-150713941 Lactuca sativa
Lsat_1_v5_gn_0_5321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 150703942-150713941 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468336 5263 Asterids View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain