Gene : Lsat_1_v5_gn_9_101640 L. sativa V8
Defline:  (1 of 5) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3185
Name:  ? Lsat_1_v5_gn_9_101640 Secondary Identifier:  ? PAC:38923329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_101640 0.5kb upstream 0.5kb upstream 10938   true Lsat_1_v8_lg_9: 161338558-161349495 Lactuca sativa
Lsat_1_v5_gn_9_101640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 161348996-161349495 Lactuca sativa
Lsat_1_v5_gn_9_101640 0.5kb downstream 0.5kb downstream 10938   true Lsat_1_v8_lg_9: 161338058-161348995 Lactuca sativa
Lsat_1_v5_gn_9_101640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 161338058-161338557 Lactuca sativa
Lsat_1_v5_gn_9_101640 1.0kb upstream 1.0kb upstream 11438   true Lsat_1_v8_lg_9: 161338558-161349995 Lactuca sativa
Lsat_1_v5_gn_9_101640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 161348996-161349995 Lactuca sativa
Lsat_1_v5_gn_9_101640 1.0kb downstream 1.0kb downstream 11438   true Lsat_1_v8_lg_9: 161337558-161348995 Lactuca sativa
Lsat_1_v5_gn_9_101640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 161337558-161338557 Lactuca sativa
Lsat_1_v5_gn_9_101640 2.0kb upstream 2.0kb upstream 12438   true Lsat_1_v8_lg_9: 161338558-161350995 Lactuca sativa
Lsat_1_v5_gn_9_101640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 161348996-161350995 Lactuca sativa
Lsat_1_v5_gn_9_101640 2.0kb downstream 2.0kb downstream 12438   true Lsat_1_v8_lg_9: 161336558-161348995 Lactuca sativa
Lsat_1_v5_gn_9_101640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 161336558-161338557 Lactuca sativa
Lsat_1_v5_gn_9_101640 5.0kb upstream 5.0kb upstream 15438   true Lsat_1_v8_lg_9: 161338558-161353995 Lactuca sativa
Lsat_1_v5_gn_9_101640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 161348996-161353995 Lactuca sativa
Lsat_1_v5_gn_9_101640 5.0kb downstream 5.0kb downstream 15438   true Lsat_1_v8_lg_9: 161333558-161348995 Lactuca sativa
Lsat_1_v5_gn_9_101640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 161333558-161338557 Lactuca sativa
Lsat_1_v5_gn_9_101640 10.0kb upstream 10.0kb upstream 20438   true Lsat_1_v8_lg_9: 161338558-161358995 Lactuca sativa
Lsat_1_v5_gn_9_101640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 161348996-161358995 Lactuca sativa
Lsat_1_v5_gn_9_101640 10.0kb downstream 10.0kb downstream 20438   true Lsat_1_v8_lg_9: 161328558-161348995 Lactuca sativa
Lsat_1_v5_gn_9_101640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 161328558-161338557 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476294 5263 Asterids View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain