Gene : Lsat_1_v5_gn_9_105061 L. sativa V8
Defline:  (1 of 1) 2.4.1.182 - Lipid-A-disaccharide synthase Genomic Order:  3316
Name:  ? Lsat_1_v5_gn_9_105061 Secondary Identifier:  ? PAC:38924720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa NAGLIPASYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_105061 0.5kb upstream 0.5kb upstream 3098   true Lsat_1_v8_lg_9: 171054453-171057550 Lactuca sativa
Lsat_1_v5_gn_9_105061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 171057051-171057550 Lactuca sativa
Lsat_1_v5_gn_9_105061 0.5kb downstream 0.5kb downstream 3098   true Lsat_1_v8_lg_9: 171053953-171057050 Lactuca sativa
Lsat_1_v5_gn_9_105061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 171053953-171054452 Lactuca sativa
Lsat_1_v5_gn_9_105061 1.0kb upstream 1.0kb upstream 3598   true Lsat_1_v8_lg_9: 171054453-171058050 Lactuca sativa
Lsat_1_v5_gn_9_105061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 171057051-171058050 Lactuca sativa
Lsat_1_v5_gn_9_105061 1.0kb downstream 1.0kb downstream 3598   true Lsat_1_v8_lg_9: 171053453-171057050 Lactuca sativa
Lsat_1_v5_gn_9_105061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 171053453-171054452 Lactuca sativa
Lsat_1_v5_gn_9_105061 2.0kb upstream 2.0kb upstream 4598   true Lsat_1_v8_lg_9: 171054453-171059050 Lactuca sativa
Lsat_1_v5_gn_9_105061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 171057051-171059050 Lactuca sativa
Lsat_1_v5_gn_9_105061 2.0kb downstream 2.0kb downstream 4598   true Lsat_1_v8_lg_9: 171052453-171057050 Lactuca sativa
Lsat_1_v5_gn_9_105061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 171052453-171054452 Lactuca sativa
Lsat_1_v5_gn_9_105061 5.0kb upstream 5.0kb upstream 7598   true Lsat_1_v8_lg_9: 171054453-171062050 Lactuca sativa
Lsat_1_v5_gn_9_105061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 171057051-171062050 Lactuca sativa
Lsat_1_v5_gn_9_105061 5.0kb downstream 5.0kb downstream 7598   true Lsat_1_v8_lg_9: 171049453-171057050 Lactuca sativa
Lsat_1_v5_gn_9_105061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 171049453-171054452 Lactuca sativa
Lsat_1_v5_gn_9_105061 10.0kb upstream 10.0kb upstream 12598   true Lsat_1_v8_lg_9: 171054453-171067050 Lactuca sativa
Lsat_1_v5_gn_9_105061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 171057051-171067050 Lactuca sativa
Lsat_1_v5_gn_9_105061 10.0kb downstream 10.0kb downstream 12598   true Lsat_1_v8_lg_9: 171044453-171057050 Lactuca sativa
Lsat_1_v5_gn_9_105061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 171044453-171054452 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473842 5263 Asterids View MSA
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain