Gene : Lsat_1_v5_gn_9_111560 L. sativa V8
Defline:  (1 of 6) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  3518
Name:  ? Lsat_1_v5_gn_9_111560 Secondary Identifier:  ? PAC:38923063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_111560 0.5kb upstream 0.5kb upstream 3970   true Lsat_1_v8_lg_9: 182349689-182353658 Lactuca sativa
Lsat_1_v5_gn_9_111560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 182353159-182353658 Lactuca sativa
Lsat_1_v5_gn_9_111560 0.5kb downstream 0.5kb downstream 3970   true Lsat_1_v8_lg_9: 182349189-182353158 Lactuca sativa
Lsat_1_v5_gn_9_111560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 182349189-182349688 Lactuca sativa
Lsat_1_v5_gn_9_111560 1.0kb upstream 1.0kb upstream 4470   true Lsat_1_v8_lg_9: 182349689-182354158 Lactuca sativa
Lsat_1_v5_gn_9_111560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 182353159-182354158 Lactuca sativa
Lsat_1_v5_gn_9_111560 1.0kb downstream 1.0kb downstream 4470   true Lsat_1_v8_lg_9: 182348689-182353158 Lactuca sativa
Lsat_1_v5_gn_9_111560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 182348689-182349688 Lactuca sativa
Lsat_1_v5_gn_9_111560 2.0kb upstream 2.0kb upstream 5470   true Lsat_1_v8_lg_9: 182349689-182355158 Lactuca sativa
Lsat_1_v5_gn_9_111560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 182353159-182355158 Lactuca sativa
Lsat_1_v5_gn_9_111560 2.0kb downstream 2.0kb downstream 5470   true Lsat_1_v8_lg_9: 182347689-182353158 Lactuca sativa
Lsat_1_v5_gn_9_111560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 182347689-182349688 Lactuca sativa
Lsat_1_v5_gn_9_111560 5.0kb upstream 5.0kb upstream 8470   true Lsat_1_v8_lg_9: 182349689-182358158 Lactuca sativa
Lsat_1_v5_gn_9_111560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 182353159-182358158 Lactuca sativa
Lsat_1_v5_gn_9_111560 5.0kb downstream 5.0kb downstream 8470   true Lsat_1_v8_lg_9: 182344689-182353158 Lactuca sativa
Lsat_1_v5_gn_9_111560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 182344689-182349688 Lactuca sativa
Lsat_1_v5_gn_9_111560 10.0kb upstream 10.0kb upstream 13470   true Lsat_1_v8_lg_9: 182349689-182363158 Lactuca sativa
Lsat_1_v5_gn_9_111560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 182353159-182363158 Lactuca sativa
Lsat_1_v5_gn_9_111560 10.0kb downstream 10.0kb downstream 13470   true Lsat_1_v8_lg_9: 182339689-182353158 Lactuca sativa
Lsat_1_v5_gn_9_111560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 182339689-182349688 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470497 5263 Asterids View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain