Gene : Lsat_1_v5_gn_9_113340 L. sativa V8
Defline:  (1 of 1) PTHR31412//PTHR31412:SF2 - FAMILY NOT NAMED // ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED Genomic Order:  3551
Name:  ? Lsat_1_v5_gn_9_113340 Secondary Identifier:  ? PAC:38926174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_113340 0.5kb upstream 0.5kb upstream 3541   true Lsat_1_v8_lg_9: 184467671-184471211 Lactuca sativa
Lsat_1_v5_gn_9_113340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 184470712-184471211 Lactuca sativa
Lsat_1_v5_gn_9_113340 0.5kb downstream 0.5kb downstream 3541   true Lsat_1_v8_lg_9: 184467171-184470711 Lactuca sativa
Lsat_1_v5_gn_9_113340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 184467171-184467670 Lactuca sativa
Lsat_1_v5_gn_9_113340 1.0kb upstream 1.0kb upstream 4041   true Lsat_1_v8_lg_9: 184467671-184471711 Lactuca sativa
Lsat_1_v5_gn_9_113340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 184470712-184471711 Lactuca sativa
Lsat_1_v5_gn_9_113340 1.0kb downstream 1.0kb downstream 4041   true Lsat_1_v8_lg_9: 184466671-184470711 Lactuca sativa
Lsat_1_v5_gn_9_113340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 184466671-184467670 Lactuca sativa
Lsat_1_v5_gn_9_113340 2.0kb upstream 2.0kb upstream 5041   true Lsat_1_v8_lg_9: 184467671-184472711 Lactuca sativa
Lsat_1_v5_gn_9_113340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 184470712-184472711 Lactuca sativa
Lsat_1_v5_gn_9_113340 2.0kb downstream 2.0kb downstream 5041   true Lsat_1_v8_lg_9: 184465671-184470711 Lactuca sativa
Lsat_1_v5_gn_9_113340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 184465671-184467670 Lactuca sativa
Lsat_1_v5_gn_9_113340 5.0kb upstream 5.0kb upstream 8041   true Lsat_1_v8_lg_9: 184467671-184475711 Lactuca sativa
Lsat_1_v5_gn_9_113340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 184470712-184475711 Lactuca sativa
Lsat_1_v5_gn_9_113340 5.0kb downstream 5.0kb downstream 8041   true Lsat_1_v8_lg_9: 184462671-184470711 Lactuca sativa
Lsat_1_v5_gn_9_113340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 184462671-184467670 Lactuca sativa
Lsat_1_v5_gn_9_113340 10.0kb upstream 10.0kb upstream 13041   true Lsat_1_v8_lg_9: 184467671-184480711 Lactuca sativa
Lsat_1_v5_gn_9_113340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 184470712-184480711 Lactuca sativa
Lsat_1_v5_gn_9_113340 10.0kb downstream 10.0kb downstream 13041   true Lsat_1_v8_lg_9: 184457671-184470711 Lactuca sativa
Lsat_1_v5_gn_9_113340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 184457671-184467670 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469384 5263 Asterids View MSA
123738003 5271 Pentapetalae View MSA
122792522 5272 Eudicot View MSA
122042498 5273 Angiosperm View MSA
121347143 5274 Embryophyte View MSA
123425233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain