Gene : Lsat_1_v5_gn_9_113620 L. sativa V8
Defline:  (1 of 2) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  3566
Name:  ? Lsat_1_v5_gn_9_113620 Secondary Identifier:  ? PAC:38927201
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5097 Lactuca sativa pathologic  
Lsativa PWY-724 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_113620 0.5kb upstream 0.5kb upstream 3913   true Lsat_1_v8_lg_9: 185219596-185223508 Lactuca sativa
Lsat_1_v5_gn_9_113620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 185219596-185220095 Lactuca sativa
Lsat_1_v5_gn_9_113620 0.5kb downstream 0.5kb downstream 3913   true Lsat_1_v8_lg_9: 185220096-185224008 Lactuca sativa
Lsat_1_v5_gn_9_113620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 185223509-185224008 Lactuca sativa
Lsat_1_v5_gn_9_113620 1.0kb upstream 1.0kb upstream 4413   true Lsat_1_v8_lg_9: 185219096-185223508 Lactuca sativa
Lsat_1_v5_gn_9_113620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 185219096-185220095 Lactuca sativa
Lsat_1_v5_gn_9_113620 1.0kb downstream 1.0kb downstream 4413   true Lsat_1_v8_lg_9: 185220096-185224508 Lactuca sativa
Lsat_1_v5_gn_9_113620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 185223509-185224508 Lactuca sativa
Lsat_1_v5_gn_9_113620 2.0kb upstream 2.0kb upstream 5413   true Lsat_1_v8_lg_9: 185218096-185223508 Lactuca sativa
Lsat_1_v5_gn_9_113620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 185218096-185220095 Lactuca sativa
Lsat_1_v5_gn_9_113620 2.0kb downstream 2.0kb downstream 5413   true Lsat_1_v8_lg_9: 185220096-185225508 Lactuca sativa
Lsat_1_v5_gn_9_113620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 185223509-185225508 Lactuca sativa
Lsat_1_v5_gn_9_113620 5.0kb upstream 5.0kb upstream 8413   true Lsat_1_v8_lg_9: 185215096-185223508 Lactuca sativa
Lsat_1_v5_gn_9_113620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 185215096-185220095 Lactuca sativa
Lsat_1_v5_gn_9_113620 5.0kb downstream 5.0kb downstream 8413   true Lsat_1_v8_lg_9: 185220096-185228508 Lactuca sativa
Lsat_1_v5_gn_9_113620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 185223509-185228508 Lactuca sativa
Lsat_1_v5_gn_9_113620 10.0kb upstream 10.0kb upstream 13413   true Lsat_1_v8_lg_9: 185210096-185223508 Lactuca sativa
Lsat_1_v5_gn_9_113620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 185210096-185220095 Lactuca sativa
Lsat_1_v5_gn_9_113620 10.0kb downstream 10.0kb downstream 13413   true Lsat_1_v8_lg_9: 185220096-185233508 Lactuca sativa
Lsat_1_v5_gn_9_113620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 185223509-185233508 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473370 5263 Asterids View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain