Gene : Lsat_1_v5_gn_9_114521 L. sativa V8
Defline:  (1 of 1) PTHR11540:SF21 - MALATE DEHYDROGENASE, GLYOXYSOMAL Genomic Order:  3591
Name:  ? Lsat_1_v5_gn_9_114521 Secondary Identifier:  ? PAC:38925073
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa GLYOXYLATE-BYPASS Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa PWY-561 Lactuca sativa pathologic  
Lsativa PWY-5690 Lactuca sativa pathologic  
Lsativa PWY-7115 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_114521 0.5kb upstream 0.5kb upstream 4084   true Lsat_1_v8_lg_9: 186691784-186695867 Lactuca sativa
Lsat_1_v5_gn_9_114521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 186695368-186695867 Lactuca sativa
Lsat_1_v5_gn_9_114521 0.5kb downstream 0.5kb downstream 4084   true Lsat_1_v8_lg_9: 186691284-186695367 Lactuca sativa
Lsat_1_v5_gn_9_114521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 186691284-186691783 Lactuca sativa
Lsat_1_v5_gn_9_114521 1.0kb upstream 1.0kb upstream 4584   true Lsat_1_v8_lg_9: 186691784-186696367 Lactuca sativa
Lsat_1_v5_gn_9_114521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 186695368-186696367 Lactuca sativa
Lsat_1_v5_gn_9_114521 1.0kb downstream 1.0kb downstream 4584   true Lsat_1_v8_lg_9: 186690784-186695367 Lactuca sativa
Lsat_1_v5_gn_9_114521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 186690784-186691783 Lactuca sativa
Lsat_1_v5_gn_9_114521 2.0kb upstream 2.0kb upstream 5584   true Lsat_1_v8_lg_9: 186691784-186697367 Lactuca sativa
Lsat_1_v5_gn_9_114521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 186695368-186697367 Lactuca sativa
Lsat_1_v5_gn_9_114521 2.0kb downstream 2.0kb downstream 5584   true Lsat_1_v8_lg_9: 186689784-186695367 Lactuca sativa
Lsat_1_v5_gn_9_114521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 186689784-186691783 Lactuca sativa
Lsat_1_v5_gn_9_114521 5.0kb upstream 5.0kb upstream 8584   true Lsat_1_v8_lg_9: 186691784-186700367 Lactuca sativa
Lsat_1_v5_gn_9_114521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 186695368-186700367 Lactuca sativa
Lsat_1_v5_gn_9_114521 5.0kb downstream 5.0kb downstream 8584   true Lsat_1_v8_lg_9: 186686784-186695367 Lactuca sativa
Lsat_1_v5_gn_9_114521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 186686784-186691783 Lactuca sativa
Lsat_1_v5_gn_9_114521 10.0kb upstream 10.0kb upstream 13584   true Lsat_1_v8_lg_9: 186691784-186705367 Lactuca sativa
Lsat_1_v5_gn_9_114521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 186695368-186705367 Lactuca sativa
Lsat_1_v5_gn_9_114521 10.0kb downstream 10.0kb downstream 13584   true Lsat_1_v8_lg_9: 186681784-186695367 Lactuca sativa
Lsat_1_v5_gn_9_114521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 186681784-186691783 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478903 5263 Asterids View MSA
123748567 5271 Pentapetalae View MSA
122789839 5272 Eudicot View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain