Gene : Lsat_1_v5_gn_9_20081 L. sativa V8
Defline:  (1 of 5) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Genomic Order:  647
Name:  ? Lsat_1_v5_gn_9_20081 Secondary Identifier:  ? PAC:38926278
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_20081 0.5kb upstream 0.5kb upstream 3629   true Lsat_1_v8_lg_9: 21049276-21052904 Lactuca sativa
Lsat_1_v5_gn_9_20081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 21052405-21052904 Lactuca sativa
Lsat_1_v5_gn_9_20081 0.5kb downstream 0.5kb downstream 3629   true Lsat_1_v8_lg_9: 21048776-21052404 Lactuca sativa
Lsat_1_v5_gn_9_20081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 21048776-21049275 Lactuca sativa
Lsat_1_v5_gn_9_20081 1.0kb upstream 1.0kb upstream 4129   true Lsat_1_v8_lg_9: 21049276-21053404 Lactuca sativa
Lsat_1_v5_gn_9_20081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 21052405-21053404 Lactuca sativa
Lsat_1_v5_gn_9_20081 1.0kb downstream 1.0kb downstream 4129   true Lsat_1_v8_lg_9: 21048276-21052404 Lactuca sativa
Lsat_1_v5_gn_9_20081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 21048276-21049275 Lactuca sativa
Lsat_1_v5_gn_9_20081 2.0kb upstream 2.0kb upstream 5129   true Lsat_1_v8_lg_9: 21049276-21054404 Lactuca sativa
Lsat_1_v5_gn_9_20081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 21052405-21054404 Lactuca sativa
Lsat_1_v5_gn_9_20081 2.0kb downstream 2.0kb downstream 5129   true Lsat_1_v8_lg_9: 21047276-21052404 Lactuca sativa
Lsat_1_v5_gn_9_20081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 21047276-21049275 Lactuca sativa
Lsat_1_v5_gn_9_20081 5.0kb upstream 5.0kb upstream 8129   true Lsat_1_v8_lg_9: 21049276-21057404 Lactuca sativa
Lsat_1_v5_gn_9_20081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 21052405-21057404 Lactuca sativa
Lsat_1_v5_gn_9_20081 5.0kb downstream 5.0kb downstream 8129   true Lsat_1_v8_lg_9: 21044276-21052404 Lactuca sativa
Lsat_1_v5_gn_9_20081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 21044276-21049275 Lactuca sativa
Lsat_1_v5_gn_9_20081 10.0kb upstream 10.0kb upstream 13129   true Lsat_1_v8_lg_9: 21049276-21062404 Lactuca sativa
Lsat_1_v5_gn_9_20081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 21052405-21062404 Lactuca sativa
Lsat_1_v5_gn_9_20081 10.0kb downstream 10.0kb downstream 13129   true Lsat_1_v8_lg_9: 21039276-21052404 Lactuca sativa
Lsat_1_v5_gn_9_20081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 21039276-21049275 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466367 5263 Asterids View MSA
123747200 5271 Pentapetalae View MSA
122786859 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain