Gene : Lsat_1_v5_gn_9_21601 L. sativa V8
Defline:  (1 of 1) PTHR31057//PTHR31057:SF0 - FAMILY NOT NAMED // E3 UFM1-PROTEIN LIGASE 1 Genomic Order:  715
Name:  ? Lsat_1_v5_gn_9_21601 Secondary Identifier:  ? PAC:38924138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_21601 0.5kb upstream 0.5kb upstream 6539   true Lsat_1_v8_lg_9: 24094454-24100992 Lactuca sativa
Lsat_1_v5_gn_9_21601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 24100493-24100992 Lactuca sativa
Lsat_1_v5_gn_9_21601 0.5kb downstream 0.5kb downstream 6539   true Lsat_1_v8_lg_9: 24093954-24100492 Lactuca sativa
Lsat_1_v5_gn_9_21601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 24093954-24094453 Lactuca sativa
Lsat_1_v5_gn_9_21601 1.0kb upstream 1.0kb upstream 7039   true Lsat_1_v8_lg_9: 24094454-24101492 Lactuca sativa
Lsat_1_v5_gn_9_21601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 24100493-24101492 Lactuca sativa
Lsat_1_v5_gn_9_21601 1.0kb downstream 1.0kb downstream 7039   true Lsat_1_v8_lg_9: 24093454-24100492 Lactuca sativa
Lsat_1_v5_gn_9_21601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 24093454-24094453 Lactuca sativa
Lsat_1_v5_gn_9_21601 2.0kb upstream 2.0kb upstream 8039   true Lsat_1_v8_lg_9: 24094454-24102492 Lactuca sativa
Lsat_1_v5_gn_9_21601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 24100493-24102492 Lactuca sativa
Lsat_1_v5_gn_9_21601 2.0kb downstream 2.0kb downstream 8039   true Lsat_1_v8_lg_9: 24092454-24100492 Lactuca sativa
Lsat_1_v5_gn_9_21601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 24092454-24094453 Lactuca sativa
Lsat_1_v5_gn_9_21601 5.0kb upstream 5.0kb upstream 11039   true Lsat_1_v8_lg_9: 24094454-24105492 Lactuca sativa
Lsat_1_v5_gn_9_21601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 24100493-24105492 Lactuca sativa
Lsat_1_v5_gn_9_21601 5.0kb downstream 5.0kb downstream 11039   true Lsat_1_v8_lg_9: 24089454-24100492 Lactuca sativa
Lsat_1_v5_gn_9_21601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 24089454-24094453 Lactuca sativa
Lsat_1_v5_gn_9_21601 10.0kb upstream 10.0kb upstream 16039   true Lsat_1_v8_lg_9: 24094454-24110492 Lactuca sativa
Lsat_1_v5_gn_9_21601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 24100493-24110492 Lactuca sativa
Lsat_1_v5_gn_9_21601 10.0kb downstream 10.0kb downstream 16039   true Lsat_1_v8_lg_9: 24084454-24100492 Lactuca sativa
Lsat_1_v5_gn_9_21601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 24084454-24094453 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026361 5273 Angiosperm View MSA
121471856 5263 Asterids View MSA
123747410 5271 Pentapetalae View MSA
122787420 5272 Eudicot View MSA
121346113 5274 Embryophyte View MSA
123424330 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain