Gene : Lsat_1_v5_gn_9_27341 L. sativa V8
Defline:  (1 of 2) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 Genomic Order:  933
Name:  ? Lsat_1_v5_gn_9_27341 Secondary Identifier:  ? PAC:38924531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_27341 0.5kb upstream 0.5kb upstream 3257   true Lsat_1_v8_lg_9: 31817914-31821170 Lactuca sativa
Lsat_1_v5_gn_9_27341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 31817914-31818413 Lactuca sativa
Lsat_1_v5_gn_9_27341 0.5kb downstream 0.5kb downstream 3257   true Lsat_1_v8_lg_9: 31818414-31821670 Lactuca sativa
Lsat_1_v5_gn_9_27341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 31821171-31821670 Lactuca sativa
Lsat_1_v5_gn_9_27341 1.0kb upstream 1.0kb upstream 3757   true Lsat_1_v8_lg_9: 31817414-31821170 Lactuca sativa
Lsat_1_v5_gn_9_27341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 31817414-31818413 Lactuca sativa
Lsat_1_v5_gn_9_27341 1.0kb downstream 1.0kb downstream 3757   true Lsat_1_v8_lg_9: 31818414-31822170 Lactuca sativa
Lsat_1_v5_gn_9_27341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 31821171-31822170 Lactuca sativa
Lsat_1_v5_gn_9_27341 2.0kb upstream 2.0kb upstream 4757   true Lsat_1_v8_lg_9: 31816414-31821170 Lactuca sativa
Lsat_1_v5_gn_9_27341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 31816414-31818413 Lactuca sativa
Lsat_1_v5_gn_9_27341 2.0kb downstream 2.0kb downstream 4757   true Lsat_1_v8_lg_9: 31818414-31823170 Lactuca sativa
Lsat_1_v5_gn_9_27341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 31821171-31823170 Lactuca sativa
Lsat_1_v5_gn_9_27341 5.0kb upstream 5.0kb upstream 7757   true Lsat_1_v8_lg_9: 31813414-31821170 Lactuca sativa
Lsat_1_v5_gn_9_27341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 31813414-31818413 Lactuca sativa
Lsat_1_v5_gn_9_27341 5.0kb downstream 5.0kb downstream 7757   true Lsat_1_v8_lg_9: 31818414-31826170 Lactuca sativa
Lsat_1_v5_gn_9_27341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 31821171-31826170 Lactuca sativa
Lsat_1_v5_gn_9_27341 10.0kb upstream 10.0kb upstream 12757   true Lsat_1_v8_lg_9: 31808414-31821170 Lactuca sativa
Lsat_1_v5_gn_9_27341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 31808414-31818413 Lactuca sativa
Lsat_1_v5_gn_9_27341 10.0kb downstream 10.0kb downstream 12757   true Lsat_1_v8_lg_9: 31818414-31831170 Lactuca sativa
Lsat_1_v5_gn_9_27341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 31821171-31831170 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482654 5263 Asterids View MSA
123753423 5271 Pentapetalae View MSA
122793628 5272 Eudicot View MSA
122049418 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain