Gene : Lsat_1_v5_gn_9_30021 L. sativa V8
Defline:  (1 of 1) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1016
Name:  ? Lsat_1_v5_gn_9_30021 Secondary Identifier:  ? PAC:38927455
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_30021 0.5kb upstream 0.5kb upstream 3892   true Lsat_1_v8_lg_9: 33926005-33929896 Lactuca sativa
Lsat_1_v5_gn_9_30021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 33929397-33929896 Lactuca sativa
Lsat_1_v5_gn_9_30021 0.5kb downstream 0.5kb downstream 3892   true Lsat_1_v8_lg_9: 33925505-33929396 Lactuca sativa
Lsat_1_v5_gn_9_30021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 33925505-33926004 Lactuca sativa
Lsat_1_v5_gn_9_30021 1.0kb upstream 1.0kb upstream 4392   true Lsat_1_v8_lg_9: 33926005-33930396 Lactuca sativa
Lsat_1_v5_gn_9_30021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 33929397-33930396 Lactuca sativa
Lsat_1_v5_gn_9_30021 1.0kb downstream 1.0kb downstream 4392   true Lsat_1_v8_lg_9: 33925005-33929396 Lactuca sativa
Lsat_1_v5_gn_9_30021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 33925005-33926004 Lactuca sativa
Lsat_1_v5_gn_9_30021 2.0kb upstream 2.0kb upstream 5392   true Lsat_1_v8_lg_9: 33926005-33931396 Lactuca sativa
Lsat_1_v5_gn_9_30021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 33929397-33931396 Lactuca sativa
Lsat_1_v5_gn_9_30021 2.0kb downstream 2.0kb downstream 5392   true Lsat_1_v8_lg_9: 33924005-33929396 Lactuca sativa
Lsat_1_v5_gn_9_30021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 33924005-33926004 Lactuca sativa
Lsat_1_v5_gn_9_30021 5.0kb upstream 5.0kb upstream 8392   true Lsat_1_v8_lg_9: 33926005-33934396 Lactuca sativa
Lsat_1_v5_gn_9_30021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 33929397-33934396 Lactuca sativa
Lsat_1_v5_gn_9_30021 5.0kb downstream 5.0kb downstream 8392   true Lsat_1_v8_lg_9: 33921005-33929396 Lactuca sativa
Lsat_1_v5_gn_9_30021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 33921005-33926004 Lactuca sativa
Lsat_1_v5_gn_9_30021 10.0kb upstream 10.0kb upstream 13392   true Lsat_1_v8_lg_9: 33926005-33939396 Lactuca sativa
Lsat_1_v5_gn_9_30021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 33929397-33939396 Lactuca sativa
Lsat_1_v5_gn_9_30021 10.0kb downstream 10.0kb downstream 13392   true Lsat_1_v8_lg_9: 33916005-33929396 Lactuca sativa
Lsat_1_v5_gn_9_30021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 33916005-33926004 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469173 5263 Asterids View MSA
123737894 5271 Pentapetalae View MSA
122788479 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain