Gene : Lsat_1_v5_gn_9_33501 L. sativa V8
Defline:  (1 of 1) PTHR22950//PTHR22950:SF313 - AMINO ACID TRANSPORTER // AMINO ACID TRANSPORTER FAMILY PROTEIN-RELATED Genomic Order:  1090
Name:  ? Lsat_1_v5_gn_9_33501 Secondary Identifier:  ? PAC:38925361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_33501 0.5kb upstream 0.5kb upstream 4179   true Lsat_1_v8_lg_9: 35804248-35808426 Lactuca sativa
Lsat_1_v5_gn_9_33501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 35804248-35804747 Lactuca sativa
Lsat_1_v5_gn_9_33501 0.5kb downstream 0.5kb downstream 4179   true Lsat_1_v8_lg_9: 35804748-35808926 Lactuca sativa
Lsat_1_v5_gn_9_33501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 35808427-35808926 Lactuca sativa
Lsat_1_v5_gn_9_33501 1.0kb upstream 1.0kb upstream 4679   true Lsat_1_v8_lg_9: 35803748-35808426 Lactuca sativa
Lsat_1_v5_gn_9_33501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 35803748-35804747 Lactuca sativa
Lsat_1_v5_gn_9_33501 1.0kb downstream 1.0kb downstream 4679   true Lsat_1_v8_lg_9: 35804748-35809426 Lactuca sativa
Lsat_1_v5_gn_9_33501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 35808427-35809426 Lactuca sativa
Lsat_1_v5_gn_9_33501 2.0kb upstream 2.0kb upstream 5679   true Lsat_1_v8_lg_9: 35802748-35808426 Lactuca sativa
Lsat_1_v5_gn_9_33501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 35802748-35804747 Lactuca sativa
Lsat_1_v5_gn_9_33501 2.0kb downstream 2.0kb downstream 5679   true Lsat_1_v8_lg_9: 35804748-35810426 Lactuca sativa
Lsat_1_v5_gn_9_33501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 35808427-35810426 Lactuca sativa
Lsat_1_v5_gn_9_33501 5.0kb upstream 5.0kb upstream 8679   true Lsat_1_v8_lg_9: 35799748-35808426 Lactuca sativa
Lsat_1_v5_gn_9_33501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 35799748-35804747 Lactuca sativa
Lsat_1_v5_gn_9_33501 5.0kb downstream 5.0kb downstream 8679   true Lsat_1_v8_lg_9: 35804748-35813426 Lactuca sativa
Lsat_1_v5_gn_9_33501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 35808427-35813426 Lactuca sativa
Lsat_1_v5_gn_9_33501 10.0kb upstream 10.0kb upstream 13679   true Lsat_1_v8_lg_9: 35794748-35808426 Lactuca sativa
Lsat_1_v5_gn_9_33501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 35794748-35804747 Lactuca sativa
Lsat_1_v5_gn_9_33501 10.0kb downstream 10.0kb downstream 13679   true Lsat_1_v8_lg_9: 35804748-35818426 Lactuca sativa
Lsat_1_v5_gn_9_33501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 35808427-35818426 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474746 5263 Asterids View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain