Gene : Lsat_1_v5_gn_9_11741 L. sativa V8

Defline:  (1 of 19) PTHR22838 - WD REPEAT PROTEIN 26-RELATED Genomic Order:  368
Name:  ? Lsat_1_v5_gn_9_11741 Secondary Identifier:  ? PAC:38924587

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_11741 0.5kb upstream 0.5kb upstream 3669   true Lsat_1_v8_lg_9: 13517325-13520993 Lactuca sativa
Lsat_1_v5_gn_9_11741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 13520494-13520993 Lactuca sativa
Lsat_1_v5_gn_9_11741 0.5kb downstream 0.5kb downstream 3669   true Lsat_1_v8_lg_9: 13516825-13520493 Lactuca sativa
Lsat_1_v5_gn_9_11741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 13516825-13517324 Lactuca sativa
Lsat_1_v5_gn_9_11741 1.0kb upstream 1.0kb upstream 4169   true Lsat_1_v8_lg_9: 13517325-13521493 Lactuca sativa
Lsat_1_v5_gn_9_11741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 13520494-13521493 Lactuca sativa
Lsat_1_v5_gn_9_11741 1.0kb downstream 1.0kb downstream 4169   true Lsat_1_v8_lg_9: 13516325-13520493 Lactuca sativa
Lsat_1_v5_gn_9_11741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 13516325-13517324 Lactuca sativa
Lsat_1_v5_gn_9_11741 2.0kb upstream 2.0kb upstream 5169   true Lsat_1_v8_lg_9: 13517325-13522493 Lactuca sativa
Lsat_1_v5_gn_9_11741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 13520494-13522493 Lactuca sativa
Lsat_1_v5_gn_9_11741 2.0kb downstream 2.0kb downstream 5169   true Lsat_1_v8_lg_9: 13515325-13520493 Lactuca sativa
Lsat_1_v5_gn_9_11741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 13515325-13517324 Lactuca sativa
Lsat_1_v5_gn_9_11741 5.0kb upstream 5.0kb upstream 8169   true Lsat_1_v8_lg_9: 13517325-13525493 Lactuca sativa
Lsat_1_v5_gn_9_11741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 13520494-13525493 Lactuca sativa
Lsat_1_v5_gn_9_11741 5.0kb downstream 5.0kb downstream 8169   true Lsat_1_v8_lg_9: 13512325-13520493 Lactuca sativa
Lsat_1_v5_gn_9_11741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 13512325-13517324 Lactuca sativa
Lsat_1_v5_gn_9_11741 10.0kb upstream 10.0kb upstream 13169   true Lsat_1_v8_lg_9: 13517325-13530493 Lactuca sativa
Lsat_1_v5_gn_9_11741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 13520494-13530493 Lactuca sativa
Lsat_1_v5_gn_9_11741 10.0kb downstream 10.0kb downstream 13169   true Lsat_1_v8_lg_9: 13507325-13520493 Lactuca sativa
Lsat_1_v5_gn_9_11741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 13507325-13517324 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474647 5263 Asterids View MSA
123740658 5271 Pentapetalae View MSA
122788774 5272 Eudicot View MSA
122043991 5273 Angiosperm View MSA
121310222 5274 Embryophyte View MSA
123426468 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain