Gene : Lsat_1_v5_gn_9_5980 L. sativa V8
Defline:  (1 of 1) PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Genomic Order:  99
Name:  ? Lsat_1_v5_gn_9_5980 Secondary Identifier:  ? PAC:38921770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_5980 0.5kb upstream 0.5kb upstream 8958   true Lsat_1_v8_lg_9: 2369409-2378366 Lactuca sativa
Lsat_1_v5_gn_9_5980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 2377867-2378366 Lactuca sativa
Lsat_1_v5_gn_9_5980 0.5kb downstream 0.5kb downstream 8958   true Lsat_1_v8_lg_9: 2368909-2377866 Lactuca sativa
Lsat_1_v5_gn_9_5980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 2368909-2369408 Lactuca sativa
Lsat_1_v5_gn_9_5980 1.0kb upstream 1.0kb upstream 9458   true Lsat_1_v8_lg_9: 2369409-2378866 Lactuca sativa
Lsat_1_v5_gn_9_5980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 2377867-2378866 Lactuca sativa
Lsat_1_v5_gn_9_5980 1.0kb downstream 1.0kb downstream 9458   true Lsat_1_v8_lg_9: 2368409-2377866 Lactuca sativa
Lsat_1_v5_gn_9_5980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 2368409-2369408 Lactuca sativa
Lsat_1_v5_gn_9_5980 2.0kb upstream 2.0kb upstream 10458   true Lsat_1_v8_lg_9: 2369409-2379866 Lactuca sativa
Lsat_1_v5_gn_9_5980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 2377867-2379866 Lactuca sativa
Lsat_1_v5_gn_9_5980 2.0kb downstream 2.0kb downstream 10458   true Lsat_1_v8_lg_9: 2367409-2377866 Lactuca sativa
Lsat_1_v5_gn_9_5980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 2367409-2369408 Lactuca sativa
Lsat_1_v5_gn_9_5980 5.0kb upstream 5.0kb upstream 13458   true Lsat_1_v8_lg_9: 2369409-2382866 Lactuca sativa
Lsat_1_v5_gn_9_5980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 2377867-2382866 Lactuca sativa
Lsat_1_v5_gn_9_5980 5.0kb downstream 5.0kb downstream 13458   true Lsat_1_v8_lg_9: 2364409-2377866 Lactuca sativa
Lsat_1_v5_gn_9_5980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 2364409-2369408 Lactuca sativa
Lsat_1_v5_gn_9_5980 10.0kb upstream 10.0kb upstream 18458   true Lsat_1_v8_lg_9: 2369409-2387866 Lactuca sativa
Lsat_1_v5_gn_9_5980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 2377867-2387866 Lactuca sativa
Lsat_1_v5_gn_9_5980 10.0kb downstream 10.0kb downstream 18458   true Lsat_1_v8_lg_9: 2359409-2377866 Lactuca sativa
Lsat_1_v5_gn_9_5980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 2359409-2369408 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471684 5263 Asterids View MSA
123750917 5271 Pentapetalae View MSA
122796089 5272 Eudicot View MSA
122044227 5273 Angiosperm View MSA
121348922 5274 Embryophyte View MSA
123424861 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain