Gene : Lsat_1_v5_gn_9_69161 L. sativa V8
Defline:  (1 of 2) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Genomic Order:  2258
Name:  ? Lsat_1_v5_gn_9_69161 Secondary Identifier:  ? PAC:38927161
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6121 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_69161 0.5kb upstream 0.5kb upstream 3224   true Lsat_1_v8_lg_9: 88371427-88374650 Lactuca sativa
Lsat_1_v5_gn_9_69161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 88371427-88371926 Lactuca sativa
Lsat_1_v5_gn_9_69161 0.5kb downstream 0.5kb downstream 3224   true Lsat_1_v8_lg_9: 88371927-88375150 Lactuca sativa
Lsat_1_v5_gn_9_69161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 88374651-88375150 Lactuca sativa
Lsat_1_v5_gn_9_69161 1.0kb upstream 1.0kb upstream 3724   true Lsat_1_v8_lg_9: 88370927-88374650 Lactuca sativa
Lsat_1_v5_gn_9_69161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 88370927-88371926 Lactuca sativa
Lsat_1_v5_gn_9_69161 1.0kb downstream 1.0kb downstream 3724   true Lsat_1_v8_lg_9: 88371927-88375650 Lactuca sativa
Lsat_1_v5_gn_9_69161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 88374651-88375650 Lactuca sativa
Lsat_1_v5_gn_9_69161 2.0kb upstream 2.0kb upstream 4724   true Lsat_1_v8_lg_9: 88369927-88374650 Lactuca sativa
Lsat_1_v5_gn_9_69161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 88369927-88371926 Lactuca sativa
Lsat_1_v5_gn_9_69161 2.0kb downstream 2.0kb downstream 4724   true Lsat_1_v8_lg_9: 88371927-88376650 Lactuca sativa
Lsat_1_v5_gn_9_69161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 88374651-88376650 Lactuca sativa
Lsat_1_v5_gn_9_69161 5.0kb upstream 5.0kb upstream 7724   true Lsat_1_v8_lg_9: 88366927-88374650 Lactuca sativa
Lsat_1_v5_gn_9_69161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 88366927-88371926 Lactuca sativa
Lsat_1_v5_gn_9_69161 5.0kb downstream 5.0kb downstream 7724   true Lsat_1_v8_lg_9: 88371927-88379650 Lactuca sativa
Lsat_1_v5_gn_9_69161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 88374651-88379650 Lactuca sativa
Lsat_1_v5_gn_9_69161 10.0kb upstream 10.0kb upstream 12724   true Lsat_1_v8_lg_9: 88361927-88374650 Lactuca sativa
Lsat_1_v5_gn_9_69161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 88361927-88371926 Lactuca sativa
Lsat_1_v5_gn_9_69161 10.0kb downstream 10.0kb downstream 12724   true Lsat_1_v8_lg_9: 88371927-88384650 Lactuca sativa
Lsat_1_v5_gn_9_69161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 88374651-88384650 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121449737 5263 Asterids Singleton cluster - no MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain