Gene : Lsat_1_v5_gn_9_42101 L. sativa V8
Defline:  (1 of 1) PTHR14154//PTHR14154:SF12//PTHR33401 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED // FAMILY NOT NAMED Genomic Order:  1357
Name:  ? Lsat_1_v5_gn_9_42101 Secondary Identifier:  ? PAC:38923026
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_42101 0.5kb upstream 0.5kb upstream 2036   true Lsat_1_v8_lg_9: 45630540-45632575 Lactuca sativa
Lsat_1_v5_gn_9_42101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 45632076-45632575 Lactuca sativa
Lsat_1_v5_gn_9_42101 0.5kb downstream 0.5kb downstream 2036   true Lsat_1_v8_lg_9: 45630040-45632075 Lactuca sativa
Lsat_1_v5_gn_9_42101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 45630040-45630539 Lactuca sativa
Lsat_1_v5_gn_9_42101 1.0kb upstream 1.0kb upstream 2536   true Lsat_1_v8_lg_9: 45630540-45633075 Lactuca sativa
Lsat_1_v5_gn_9_42101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 45632076-45633075 Lactuca sativa
Lsat_1_v5_gn_9_42101 1.0kb downstream 1.0kb downstream 2536   true Lsat_1_v8_lg_9: 45629540-45632075 Lactuca sativa
Lsat_1_v5_gn_9_42101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 45629540-45630539 Lactuca sativa
Lsat_1_v5_gn_9_42101 2.0kb upstream 2.0kb upstream 3536   true Lsat_1_v8_lg_9: 45630540-45634075 Lactuca sativa
Lsat_1_v5_gn_9_42101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 45632076-45634075 Lactuca sativa
Lsat_1_v5_gn_9_42101 2.0kb downstream 2.0kb downstream 3536   true Lsat_1_v8_lg_9: 45628540-45632075 Lactuca sativa
Lsat_1_v5_gn_9_42101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 45628540-45630539 Lactuca sativa
Lsat_1_v5_gn_9_42101 5.0kb upstream 5.0kb upstream 6536   true Lsat_1_v8_lg_9: 45630540-45637075 Lactuca sativa
Lsat_1_v5_gn_9_42101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 45632076-45637075 Lactuca sativa
Lsat_1_v5_gn_9_42101 5.0kb downstream 5.0kb downstream 6536   true Lsat_1_v8_lg_9: 45625540-45632075 Lactuca sativa
Lsat_1_v5_gn_9_42101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 45625540-45630539 Lactuca sativa
Lsat_1_v5_gn_9_42101 10.0kb upstream 10.0kb upstream 11536   true Lsat_1_v8_lg_9: 45630540-45642075 Lactuca sativa
Lsat_1_v5_gn_9_42101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 45632076-45642075 Lactuca sativa
Lsat_1_v5_gn_9_42101 10.0kb downstream 10.0kb downstream 11536   true Lsat_1_v8_lg_9: 45620540-45632075 Lactuca sativa
Lsat_1_v5_gn_9_42101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 45620540-45630539 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466383 5263 Asterids View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain