Gene : Lsat_1_v5_gn_9_4320 L. sativa V8
Defline:  (1 of 1) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  49
Name:  ? Lsat_1_v5_gn_9_4320 Secondary Identifier:  ? PAC:38926306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_4320 0.5kb upstream 0.5kb upstream 11243   true Lsat_1_v8_lg_9: 1192643-1203885 Lactuca sativa
Lsat_1_v5_gn_9_4320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 1203386-1203885 Lactuca sativa
Lsat_1_v5_gn_9_4320 0.5kb downstream 0.5kb downstream 11243   true Lsat_1_v8_lg_9: 1192143-1203385 Lactuca sativa
Lsat_1_v5_gn_9_4320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 1192143-1192642 Lactuca sativa
Lsat_1_v5_gn_9_4320 1.0kb upstream 1.0kb upstream 11743   true Lsat_1_v8_lg_9: 1192643-1204385 Lactuca sativa
Lsat_1_v5_gn_9_4320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 1203386-1204385 Lactuca sativa
Lsat_1_v5_gn_9_4320 1.0kb downstream 1.0kb downstream 11743   true Lsat_1_v8_lg_9: 1191643-1203385 Lactuca sativa
Lsat_1_v5_gn_9_4320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 1191643-1192642 Lactuca sativa
Lsat_1_v5_gn_9_4320 2.0kb upstream 2.0kb upstream 12743   true Lsat_1_v8_lg_9: 1192643-1205385 Lactuca sativa
Lsat_1_v5_gn_9_4320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 1203386-1205385 Lactuca sativa
Lsat_1_v5_gn_9_4320 2.0kb downstream 2.0kb downstream 12743   true Lsat_1_v8_lg_9: 1190643-1203385 Lactuca sativa
Lsat_1_v5_gn_9_4320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 1190643-1192642 Lactuca sativa
Lsat_1_v5_gn_9_4320 5.0kb upstream 5.0kb upstream 15743   true Lsat_1_v8_lg_9: 1192643-1208385 Lactuca sativa
Lsat_1_v5_gn_9_4320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 1203386-1208385 Lactuca sativa
Lsat_1_v5_gn_9_4320 5.0kb downstream 5.0kb downstream 15743   true Lsat_1_v8_lg_9: 1187643-1203385 Lactuca sativa
Lsat_1_v5_gn_9_4320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 1187643-1192642 Lactuca sativa
Lsat_1_v5_gn_9_4320 10.0kb upstream 10.0kb upstream 20743   true Lsat_1_v8_lg_9: 1192643-1213385 Lactuca sativa
Lsat_1_v5_gn_9_4320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 1203386-1213385 Lactuca sativa
Lsat_1_v5_gn_9_4320 10.0kb downstream 10.0kb downstream 20743   true Lsat_1_v8_lg_9: 1182643-1203385 Lactuca sativa
Lsat_1_v5_gn_9_4320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 1182643-1192642 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476904 5263 Asterids View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain