Gene : Lsat_1_v5_gn_9_48061 L. sativa V8
Defline:  (1 of 1) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED Genomic Order:  1687
Name:  ? Lsat_1_v5_gn_9_48061 Secondary Identifier:  ? PAC:38924844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_48061 0.5kb upstream 0.5kb upstream 3266   true Lsat_1_v8_lg_9: 56380065-56383330 Lactuca sativa
Lsat_1_v5_gn_9_48061 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 56382831-56383330 Lactuca sativa
Lsat_1_v5_gn_9_48061 0.5kb downstream 0.5kb downstream 3266   true Lsat_1_v8_lg_9: 56379565-56382830 Lactuca sativa
Lsat_1_v5_gn_9_48061 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 56379565-56380064 Lactuca sativa
Lsat_1_v5_gn_9_48061 1.0kb upstream 1.0kb upstream 3766   true Lsat_1_v8_lg_9: 56380065-56383830 Lactuca sativa
Lsat_1_v5_gn_9_48061 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 56382831-56383830 Lactuca sativa
Lsat_1_v5_gn_9_48061 1.0kb downstream 1.0kb downstream 3766   true Lsat_1_v8_lg_9: 56379065-56382830 Lactuca sativa
Lsat_1_v5_gn_9_48061 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 56379065-56380064 Lactuca sativa
Lsat_1_v5_gn_9_48061 2.0kb upstream 2.0kb upstream 4766   true Lsat_1_v8_lg_9: 56380065-56384830 Lactuca sativa
Lsat_1_v5_gn_9_48061 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 56382831-56384830 Lactuca sativa
Lsat_1_v5_gn_9_48061 2.0kb downstream 2.0kb downstream 4766   true Lsat_1_v8_lg_9: 56378065-56382830 Lactuca sativa
Lsat_1_v5_gn_9_48061 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 56378065-56380064 Lactuca sativa
Lsat_1_v5_gn_9_48061 5.0kb upstream 5.0kb upstream 7766   true Lsat_1_v8_lg_9: 56380065-56387830 Lactuca sativa
Lsat_1_v5_gn_9_48061 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 56382831-56387830 Lactuca sativa
Lsat_1_v5_gn_9_48061 5.0kb downstream 5.0kb downstream 7766   true Lsat_1_v8_lg_9: 56375065-56382830 Lactuca sativa
Lsat_1_v5_gn_9_48061 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 56375065-56380064 Lactuca sativa
Lsat_1_v5_gn_9_48061 10.0kb upstream 10.0kb upstream 12766   true Lsat_1_v8_lg_9: 56380065-56392830 Lactuca sativa
Lsat_1_v5_gn_9_48061 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 56382831-56392830 Lactuca sativa
Lsat_1_v5_gn_9_48061 10.0kb downstream 10.0kb downstream 12766   true Lsat_1_v8_lg_9: 56370065-56382830 Lactuca sativa
Lsat_1_v5_gn_9_48061 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 56370065-56380064 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469566 5263 Asterids View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain