Gene : Lsat_1_v5_gn_9_93260 L. sativa V8
Defline:  (1 of 3) K12483 - EH domain-containing protein 1 (EHD1) Genomic Order:  2872
Name:  ? Lsat_1_v5_gn_9_93260 Secondary Identifier:  ? PAC:38925126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_93260 0.5kb upstream 0.5kb upstream 4042   true Lsat_1_v8_lg_9: 144030406-144034447 Lactuca sativa
Lsat_1_v5_gn_9_93260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 144033948-144034447 Lactuca sativa
Lsat_1_v5_gn_9_93260 0.5kb downstream 0.5kb downstream 4042   true Lsat_1_v8_lg_9: 144029906-144033947 Lactuca sativa
Lsat_1_v5_gn_9_93260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 144029906-144030405 Lactuca sativa
Lsat_1_v5_gn_9_93260 1.0kb upstream 1.0kb upstream 4542   true Lsat_1_v8_lg_9: 144030406-144034947 Lactuca sativa
Lsat_1_v5_gn_9_93260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 144033948-144034947 Lactuca sativa
Lsat_1_v5_gn_9_93260 1.0kb downstream 1.0kb downstream 4542   true Lsat_1_v8_lg_9: 144029406-144033947 Lactuca sativa
Lsat_1_v5_gn_9_93260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 144029406-144030405 Lactuca sativa
Lsat_1_v5_gn_9_93260 2.0kb upstream 2.0kb upstream 5542   true Lsat_1_v8_lg_9: 144030406-144035947 Lactuca sativa
Lsat_1_v5_gn_9_93260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 144033948-144035947 Lactuca sativa
Lsat_1_v5_gn_9_93260 2.0kb downstream 2.0kb downstream 5542   true Lsat_1_v8_lg_9: 144028406-144033947 Lactuca sativa
Lsat_1_v5_gn_9_93260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 144028406-144030405 Lactuca sativa
Lsat_1_v5_gn_9_93260 5.0kb upstream 5.0kb upstream 8542   true Lsat_1_v8_lg_9: 144030406-144038947 Lactuca sativa
Lsat_1_v5_gn_9_93260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 144033948-144038947 Lactuca sativa
Lsat_1_v5_gn_9_93260 5.0kb downstream 5.0kb downstream 8542   true Lsat_1_v8_lg_9: 144025406-144033947 Lactuca sativa
Lsat_1_v5_gn_9_93260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 144025406-144030405 Lactuca sativa
Lsat_1_v5_gn_9_93260 10.0kb upstream 10.0kb upstream 13542   true Lsat_1_v8_lg_9: 144030406-144043947 Lactuca sativa
Lsat_1_v5_gn_9_93260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 144033948-144043947 Lactuca sativa
Lsat_1_v5_gn_9_93260 10.0kb downstream 10.0kb downstream 13542   true Lsat_1_v8_lg_9: 144020406-144033947 Lactuca sativa
Lsat_1_v5_gn_9_93260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 144020406-144030405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472984 5263 Asterids View MSA
123743696 5271 Pentapetalae View MSA
122797625 5272 Eudicot View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain