Gene : Lsat_1_v5_gn_9_93401 L. sativa V8
Defline:  (1 of 3) K01881 - prolyl-tRNA synthetase (PARS, proS) Genomic Order:  2908
Name:  ? Lsat_1_v5_gn_9_93401 Secondary Identifier:  ? PAC:38926178
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_93401 0.5kb upstream 0.5kb upstream 4404   true Lsat_1_v8_lg_9: 145857203-145861606 Lactuca sativa
Lsat_1_v5_gn_9_93401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 145861107-145861606 Lactuca sativa
Lsat_1_v5_gn_9_93401 0.5kb downstream 0.5kb downstream 4404   true Lsat_1_v8_lg_9: 145856703-145861106 Lactuca sativa
Lsat_1_v5_gn_9_93401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 145856703-145857202 Lactuca sativa
Lsat_1_v5_gn_9_93401 1.0kb upstream 1.0kb upstream 4904   true Lsat_1_v8_lg_9: 145857203-145862106 Lactuca sativa
Lsat_1_v5_gn_9_93401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 145861107-145862106 Lactuca sativa
Lsat_1_v5_gn_9_93401 1.0kb downstream 1.0kb downstream 4904   true Lsat_1_v8_lg_9: 145856203-145861106 Lactuca sativa
Lsat_1_v5_gn_9_93401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 145856203-145857202 Lactuca sativa
Lsat_1_v5_gn_9_93401 2.0kb upstream 2.0kb upstream 5904   true Lsat_1_v8_lg_9: 145857203-145863106 Lactuca sativa
Lsat_1_v5_gn_9_93401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 145861107-145863106 Lactuca sativa
Lsat_1_v5_gn_9_93401 2.0kb downstream 2.0kb downstream 5904   true Lsat_1_v8_lg_9: 145855203-145861106 Lactuca sativa
Lsat_1_v5_gn_9_93401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 145855203-145857202 Lactuca sativa
Lsat_1_v5_gn_9_93401 5.0kb upstream 5.0kb upstream 8904   true Lsat_1_v8_lg_9: 145857203-145866106 Lactuca sativa
Lsat_1_v5_gn_9_93401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 145861107-145866106 Lactuca sativa
Lsat_1_v5_gn_9_93401 5.0kb downstream 5.0kb downstream 8904   true Lsat_1_v8_lg_9: 145852203-145861106 Lactuca sativa
Lsat_1_v5_gn_9_93401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 145852203-145857202 Lactuca sativa
Lsat_1_v5_gn_9_93401 10.0kb upstream 10.0kb upstream 13904   true Lsat_1_v8_lg_9: 145857203-145871106 Lactuca sativa
Lsat_1_v5_gn_9_93401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 145861107-145871106 Lactuca sativa
Lsat_1_v5_gn_9_93401 10.0kb downstream 10.0kb downstream 13904   true Lsat_1_v8_lg_9: 145847203-145861106 Lactuca sativa
Lsat_1_v5_gn_9_93401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 145847203-145857202 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121449607 5263 Asterids Singleton cluster - no MSA
123755028 5271 Pentapetalae View MSA
122798313 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain