Protein Family : gamma histone variant H2AX 122048005

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  141

141 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30128.t000155 (1 of 12) K11251 - histone H2A (H2A) R. communis v0.1 510   30128: 556282-556791
29647.t000061 (1 of 12) K11251 - histone H2A (H2A) R. communis v0.1 1024   29647: 407031-408054
29647.t000062 (1 of 2) PF00125//PF16211 - Core histone H2A/H2B/H3/H4 (Histone) // C-terminus of histone H2A (Histone_H2A_C) R. communis v0.1 506   29647: 408785-409290
Cucsa.163750 (1 of 10) PTHR23430 - HISTONE H2A C. sativus v1.0 1143   scaffold01146: 189689-190831
orange1.1g032441m.g (1 of 4) KOG1756 - Histone 2A C. sinensis v1.1 787   scaffold00001: 5757531-5758317
orange1.1g032523m.g (1 of 4) KOG1756 - Histone 2A C. sinensis v1.1 937   scaffold00001: 5754932-5755868
AT1G08880 (1 of 13) K11251 - histone H2A (H2A) A. thaliana TAIR10 H2AXA 852   Chr1: 2846949-2847800
AT1G54690 (1 of 13) K11251 - histone H2A (H2A) A. thaliana TAIR10 GAMMA-H2AX 972   Chr1: 20414316-20415287
Thhalv10023750m.g (1 of 14) PTHR23430 - HISTONE H2A E. salsugineum v1.0 1564   scaffold_8: 11007535-11009098
Ciclev10002804m.g (1 of 10) PTHR23430 - HISTONE H2A C. clementina v1.0 1436   scaffold_5: 32313299-32314734
Ciclev10022778m.g (1 of 10) PTHR23430 - HISTONE H2A C. clementina v1.0 1154   scaffold_3: 45131584-45132737
Lus10002253.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 519   scaffold1478: 9420-9938
Lus10000929.g (1 of 8) KOG1757 - Histone 2A L. usitatissimum v1.0 551   scaffold3001: 52447-52997
Lus10028044.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 512   scaffold132: 486050-486561
Lus10039691.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 514   scaffold15: 1193644-1194157
Lus10027154.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 521   scaffold472: 40523-41043
Lus10003750.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 512   scaffold629: 135151-135662
Gorai.004G054400 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 962   Chr04: 5195943-5196904
Gorai.004G084700 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 936   Chr04: 10595876-10596811
Gorai.004G244200 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 1737   Chr04: 58163002-58164738
Gorai.007G291200 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 1161   Chr07: 49930244-49931404
Thecc1EG004504 (1 of 11) K11251 - histone H2A (H2A) T. cacao v1.1 774   scaffold_1: 31947913-31948686
Thecc1EG004500 (1 of 11) K11251 - histone H2A (H2A) T. cacao v1.1 2753   scaffold_1: 31930215-31932967
Thecc1EG026503 (1 of 11) K11251 - histone H2A (H2A) T. cacao v1.1 831   scaffold_5: 38707570-38708400
Migut.D00241 (1 of 13) PTHR23430 - HISTONE H2A M. guttatus v2.0 983   scaffold_4: 1076000-1076982
Migut.D00242 (1 of 13) PTHR23430 - HISTONE H2A M. guttatus v2.0 829   scaffold_4: 1077682-1078510
Migut.H02096 (1 of 13) PTHR23430 - HISTONE H2A M. guttatus v2.0 1154   scaffold_8: 20392440-20393593
Araha.5150s0019 (1 of 5) KOG1756 - Histone 2A A. halleri v1.1 776   Scaffold5150: 80702-81477
Cagra.4395s0075 (1 of 12) PTHR23430 - HISTONE H2A C. grandiflora v1.1 737   Scaffold4395: 309555-310291
Cagra.12328s0003 (1 of 12) PTHR23430 - HISTONE H2A C. grandiflora v1.1 1483   Scaffold12328: 6796-8278

141 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g032441m C. sinensis v1.1 122048005 gamma histone variant H2AX 2 5273 Angiosperm
AT1G54690.1 A. thaliana TAIR10 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Lus10027154 L. usitatissimum v1.0 122048005 gamma histone variant H2AX 6 5273 Angiosperm
Gorai.004G244200.1 G. raimondii v2.1 122048005 gamma histone variant H2AX 4 5273 Angiosperm
Gorai.007G291200.1 G. raimondii v2.1 122048005 gamma histone variant H2AX 4 5273 Angiosperm
Migut.D00242.1.p M. guttatus v2.0 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Migut.D00241.1.p M. guttatus v2.0 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Migut.H02096.1.p M. guttatus v2.0 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Glyma.03G148100.1.p G. max Wm82.a2.v1 122048005 gamma histone variant H2AX 4 5273 Angiosperm
Bostr.25219s0059.1.p B. stricta v1.2 122048005 gamma histone variant H2AX 1 5273 Angiosperm
Medtr7g093910.1 M. truncatula Mt4.0v1 122048005 gamma histone variant H2AX 4 5273 Angiosperm
SapurV1A.0511s0140.1.p S. purpurea v1.0 122048005 gamma histone variant H2AX 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00197.10 A. trichopoda v1.0 122048005 gamma histone variant H2AX 1 5273 Angiosperm
Traes_4BS_C203755F7.1 T. aestivum v2.2 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Traes_5BS_965D5D9A4.1 T. aestivum v2.2 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Traes_5DS_392CA35C8.1 T. aestivum v2.2 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Eucgr.H04433.1.p E. grandis v2.0 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Eucgr.B02031.1.p E. grandis v2.0 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Prupe.8G250100.1.p P. persica v2.1 122048005 gamma histone variant H2AX 3 5273 Angiosperm
GSMUA_Achr3P23810_001 M. acuminata v1 122048005 gamma histone variant H2AX 2 5273 Angiosperm
GSMUA_Achr8P06850_001 M. acuminata v1 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Manes.05G070200.1.p M. esculenta v6.1 122048005 gamma histone variant H2AX 4 5273 Angiosperm
Manes.09G161500.1.p M. esculenta v6.1 122048005 gamma histone variant H2AX 4 5273 Angiosperm
Kalax.0102s0046.1.p K. laxiflora v1.1 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Kalax.1105s0009.1.p K. laxiflora v1.1 122048005 gamma histone variant H2AX 3 5273 Angiosperm
Seita.9G112800.1.p S. italica v2.2 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Bradi4g06010.1.p B. distachyon v3.1 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Bradi1g10390.1.p B. distachyon v3.1 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Brast10G066800.1.p B. stacei v1.1 122048005 gamma histone variant H2AX 2 5273 Angiosperm
Brast02G287100.1.p B. stacei v1.1 122048005 gamma histone variant H2AX 2 5273 Angiosperm