Gene : Cagra.12328s0003 C. grandiflora v1.1
Defline:  (1 of 12) PTHR23430 - HISTONE H2A Genomic Order:  3
Name:  ? Cagra.12328s0003 Secondary Identifier:  ? PAC:28903760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12328s0003 0.5kb upstream 0.5kb upstream 1983 true Scaffold12328: 6796-8778 Capsella grandiflora
Cagra.12328s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12328: 8279-8778 Capsella grandiflora
Cagra.12328s0003 0.5kb downstream 0.5kb downstream 1983 true Scaffold12328: 6296-8278 Capsella grandiflora
Cagra.12328s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12328: 6296-6795 Capsella grandiflora
Cagra.12328s0003 1.0kb upstream 1.0kb upstream 2483 true Scaffold12328: 6796-9278 Capsella grandiflora
Cagra.12328s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12328: 8279-9278 Capsella grandiflora
Cagra.12328s0003 1.0kb downstream 1.0kb downstream 2483 true Scaffold12328: 5796-8278 Capsella grandiflora
Cagra.12328s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12328: 5796-6795 Capsella grandiflora
Cagra.12328s0003 2.0kb upstream 2.0kb upstream 2897 true Scaffold12328: 6796-9692 Capsella grandiflora
Cagra.12328s0003 2.0kb upstream 2.0kb upstream 1414 false Scaffold12328: 8279-9692 Capsella grandiflora
Cagra.12328s0003 2.0kb downstream 2.0kb downstream 3483 true Scaffold12328: 4796-8278 Capsella grandiflora
Cagra.12328s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12328: 4796-6795 Capsella grandiflora
Cagra.12328s0003 5.0kb upstream 5.0kb upstream 2897 true Scaffold12328: 6796-9692 Capsella grandiflora
Cagra.12328s0003 5.0kb upstream 5.0kb upstream 1414 false Scaffold12328: 8279-9692 Capsella grandiflora
Cagra.12328s0003 5.0kb downstream 5.0kb downstream 6483 true Scaffold12328: 1796-8278 Capsella grandiflora
Cagra.12328s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12328: 1796-6795 Capsella grandiflora
Cagra.12328s0003 10.0kb upstream 10.0kb upstream 2897 true Scaffold12328: 6796-9692 Capsella grandiflora
Cagra.12328s0003 10.0kb upstream 10.0kb upstream 1414 false Scaffold12328: 8279-9692 Capsella grandiflora
Cagra.12328s0003 10.0kb downstream 10.0kb downstream 8278 true Scaffold12328: 1-8278 Capsella grandiflora
Cagra.12328s0003 10.0kb downstream 10.0kb downstream 6795 false Scaffold12328: 1-6795 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337489 5261 Brassicaceae View MSA
123837661 5264 Brassicales-Malvales View MSA
124348586 5266 SBM View MSA
124250723 5268 Malvidae View MSA
124074718 5270 Rosid View MSA
123746544 5271 Pentapetalae View MSA
122795130 5272 Eudicot View MSA
122048005 5273 Angiosperm View MSA
121347523 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain