Protein Family : gamma histone variant H2AX 124250723

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  36

36 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30128.t000155 (1 of 12) K11251 - histone H2A (H2A) R. communis v0.1 510   30128: 556282-556791
29647.t000061 (1 of 12) K11251 - histone H2A (H2A) R. communis v0.1 1024   29647: 407031-408054
orange1.1g032441m.g (1 of 4) KOG1756 - Histone 2A C. sinensis v1.1 787   scaffold00001: 5757531-5758317
orange1.1g032523m.g (1 of 4) KOG1756 - Histone 2A C. sinensis v1.1 937   scaffold00001: 5754932-5755868
AT1G08880 (1 of 13) K11251 - histone H2A (H2A) A. thaliana TAIR10 H2AXA 852   Chr1: 2846949-2847800
AT1G54690 (1 of 13) K11251 - histone H2A (H2A) A. thaliana TAIR10 GAMMA-H2AX 972   Chr1: 20414316-20415287
Thhalv10023750m.g (1 of 14) PTHR23430 - HISTONE H2A E. salsugineum v1.0 1564   scaffold_8: 11007535-11009098
Ciclev10002804m.g (1 of 10) PTHR23430 - HISTONE H2A C. clementina v1.0 1436   scaffold_5: 32313299-32314734
Ciclev10022778m.g (1 of 10) PTHR23430 - HISTONE H2A C. clementina v1.0 1154   scaffold_3: 45131584-45132737
Lus10002253.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 519   scaffold1478: 9420-9938
Lus10000929.g (1 of 8) KOG1757 - Histone 2A L. usitatissimum v1.0 551   scaffold3001: 52447-52997
Lus10039691.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 514   scaffold15: 1193644-1194157
Lus10027154.g (1 of 14) KOG1756 - Histone 2A L. usitatissimum v1.0 521   scaffold472: 40523-41043
Gorai.004G054400 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 962   Chr04: 5195943-5196904
Gorai.004G244200 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 1737   Chr04: 58163002-58164738
Gorai.007G291200 (1 of 13) KOG1756 - Histone 2A G. raimondii v2.1 1161   Chr07: 49930244-49931404
Thecc1EG004504 (1 of 11) K11251 - histone H2A (H2A) T. cacao v1.1 774   scaffold_1: 31947913-31948686
Thecc1EG026503 (1 of 11) K11251 - histone H2A (H2A) T. cacao v1.1 831   scaffold_5: 38707570-38708400
Araha.5150s0019 (1 of 5) KOG1756 - Histone 2A A. halleri v1.1 776   Scaffold5150: 80702-81477
Cagra.4395s0075 (1 of 12) PTHR23430 - HISTONE H2A C. grandiflora v1.1 737   Scaffold4395: 309555-310291
Cagra.12328s0003 (1 of 12) PTHR23430 - HISTONE H2A C. grandiflora v1.1 1483   Scaffold12328: 6796-8278
Brara.H02855 (1 of 20) PTHR23430 - HISTONE H2A B. rapa FPsc v1.3 789   A08: 22117635-22118423
Brara.F00561 (1 of 20) PTHR23430 - HISTONE H2A B. rapa FPsc v1.3 687   A06: 3325285-3325971
Bostr.25219s0059 (1 of 14) PTHR23430 - HISTONE H2A B. stricta v1.2 842   Scaffold25219: 264755-265596
SapurV1A.0353s0090 (1 of 16) K11251 - histone H2A (H2A) S. purpurea v1.0 1300   chr13: 2639871-2641170
SapurV1A.0511s0140 (1 of 16) K11251 - histone H2A (H2A) S. purpurea v1.0 1154   chr05: 1685553-1686706
Manes.08G124800 (1 of 12) KOG1756 - Histone 2A M. esculenta v6.1 959   Chromosome08: 29010601-29011559
Manes.05G070200 (1 of 12) KOG1756 - Histone 2A M. esculenta v6.1 1050   Chromosome05: 5313852-5314901
AL7G50990 (1 of 19) K11251 - histone H2A (H2A) A. lyrata v2.1 1017   scaffold_7: 23258265-23259281
AL1G19310 (1 of 19) K11251 - histone H2A (H2A) A. lyrata v2.1 806   scaffold_1: 3368663-3369468

36 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g032441m C. sinensis v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
AT1G54690.1 A. thaliana TAIR10 124250723 gamma histone variant H2AX 2 5268 Malvidae
Thhalv10023750m E. salsugineum v1.0 124250723 gamma histone variant H2AX 1 5268 Malvidae
Lus10027154 L. usitatissimum v1.0 124250723 gamma histone variant H2AX 4 5268 Malvidae
Gorai.004G244200.1 G. raimondii v2.1 124250723 gamma histone variant H2AX 3 5268 Malvidae
Gorai.007G291200.1 G. raimondii v2.1 124250723 gamma histone variant H2AX 3 5268 Malvidae
Thecc1EG004504t1 T. cacao v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Cagra.12328s0003.1.p C. grandiflora v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Bostr.25219s0059.1.p B. stricta v1.2 124250723 gamma histone variant H2AX 1 5268 Malvidae
SapurV1A.0511s0140.1.p S. purpurea v1.0 124250723 gamma histone variant H2AX 2 5268 Malvidae
Manes.05G070200.1.p M. esculenta v6.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
AL1G19310.t1 A. lyrata v2.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Potri.013G028900.1.p P. trichocarpa v3.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Podel.05G044600.1.p P. deltoides WV94 v2.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Carub.0001s0822.1.p C. rubella v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
29647.m002053 R. communis v0.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
30128.m008694 R. communis v0.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
orange1.1g032523m C. sinensis v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
AT1G08880.1 A. thaliana TAIR10 124250723 gamma histone variant H2AX 2 5268 Malvidae
Ciclev10002804m C. clementina v1.0 124250723 gamma histone variant H2AX 2 5268 Malvidae
Ciclev10022778m C. clementina v1.0 124250723 gamma histone variant H2AX 2 5268 Malvidae
Lus10039691 L. usitatissimum v1.0 124250723 gamma histone variant H2AX 4 5268 Malvidae
Lus10000929 L. usitatissimum v1.0 124250723 gamma histone variant H2AX 4 5268 Malvidae
Lus10002253 L. usitatissimum v1.0 124250723 gamma histone variant H2AX 4 5268 Malvidae
Gorai.004G054400.1 G. raimondii v2.1 124250723 gamma histone variant H2AX 3 5268 Malvidae
Thecc1EG026503t1 T. cacao v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Araha.5150s0019.1.p A. halleri v1.1 124250723 gamma histone variant H2AX 1 5268 Malvidae
Cagra.4395s0075.1.p C. grandiflora v1.1 124250723 gamma histone variant H2AX 2 5268 Malvidae
Brara.F00561.1.p B. rapa FPsc v1.3 124250723 gamma histone variant H2AX 2 5268 Malvidae
Brara.H02855.1.p B. rapa FPsc v1.3 124250723 gamma histone variant H2AX 2 5268 Malvidae