Protein Family : DNA topoisomerase I alpha 122043821

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  89

89 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27613.t000003 (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) R. communis v0.1 5624   27613: 17351-22974
Cucsa.042470 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. sativus v1.0 7125   scaffold00540: 869352-876476
orange1.1g002260m.g (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. sinensis v1.1 8347   scaffold00049: 384349-392695
AT5G55310 (1 of 2) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) A. thaliana TAIR10 TOP1BETA 4901   Chr5: 22430176-22435076
AT5G55300 (1 of 2) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) A. thaliana TAIR10 TOP1ALPHA 4926   Chr5: 22424577-22429502
Thhalv10012622m.g (1 of 2) PTHR10290 - DNA TOPOISOMERASE I E. salsugineum v1.0 5201   scaffold_2: 10473952-10479152
Thhalv10012607m.g (1 of 2) PTHR10290 - DNA TOPOISOMERASE I E. salsugineum v1.0 5180   scaffold_2: 10480370-10485549
Ciclev10007398m.g (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. clementina v1.0 8401   scaffold_1: 22915349-22923749
Lus10032571.g (1 of 5) PTHR10290 - DNA TOPOISOMERASE I L. usitatissimum v1.0 4964   scaffold140: 800965-805928
Lus10043175.g (1 of 5) PTHR10290 - DNA TOPOISOMERASE I L. usitatissimum v1.0 6193   scaffold25: 1593139-1599331
Gorai.009G444700 (1 of 2) PTHR10290 - DNA TOPOISOMERASE I G. raimondii v2.1 6628   Chr09: 69579520-69586147
Gorai.007G311800 (1 of 2) PTHR10290 - DNA TOPOISOMERASE I G. raimondii v2.1 6651   Chr07: 52561626-52568276
Thecc1EG030764 (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) T. cacao v1.1 7813   scaffold_7: 1254524-1262336
Migut.K00523 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I M. guttatus v2.0 6999   scaffold_11: 2685601-2692599
Araha.28833s0005 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I A. halleri v1.1 5012   Scaffold28833: 21665-26676
Araha.28833s0004 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I A. halleri v1.1 4921   Scaffold28833: 16095-21015
Cagra.2897s0015 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I C. grandiflora v1.1 5083   Scaffold2897: 38539-43621
Cagra.2897s0017 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I C. grandiflora v1.1 5115   Scaffold2897: 46650-51764
Glyma.09G223300 (1 of 2) PTHR10290:SF3 - DNA TOPOISOMERASE 1 G. max Wm82.a2.v1 9280   Chr09: 44366083-44375362
Glyma.12G013600 (1 of 2) PTHR10290:SF3 - DNA TOPOISOMERASE 1 G. max Wm82.a2.v1 8521   Chr12: 980833-989353
Brara.B01330 (1 of 4) PTHR10290 - DNA TOPOISOMERASE I B. rapa FPsc v1.3 5072   A02: 7004194-7009265
Brara.J00978 (1 of 4) PTHR10290 - DNA TOPOISOMERASE I B. rapa FPsc v1.3 4495   A10: 9713679-9718173
Bostr.26833s0729 (1 of 1) PF01028//PF02919//PF14370 - Eukaryotic DNA topoisomerase I, catalytic core (Topoisom_I) // Eukaryotic DNA topoisomerase I, DNA binding fragment (Topoisom_I_N) // C-terminal topoisomerase domain (Topo_C_assoc) B. stricta v1.2 5142   Scaffold26833: 3822814-3827955
Medtr1g040355 (1 of 6) PTHR10290 - DNA TOPOISOMERASE I M. truncatula Mt4.0v1 10886   chr1: 14913419-14924304
Medtr0172s0010 (1 of 6) PTHR10290 - DNA TOPOISOMERASE I M. truncatula Mt4.0v1 7377   scaffold0172: 1932-9308
SapurV1A.1592s0030 (1 of 2) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) S. purpurea v1.0 7666   Scaffold1592: 44192-51857
SapurV1A.0030s0290 (1 of 2) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) S. purpurea v1.0 7072   chr16: 23034438-23041509
evm_27.TU.AmTr_v1.0_scaffold00059.214 (1 of 1) PF14370 - C-terminal topoisomerase domain (Topo_C_assoc) A. trichopoda v1.0 12651   AmTr_v1.0_scaffold00059: 3454711-3467361
Traes_7AL_2FF05F9D1 (1 of 7) PTHR10290 - DNA TOPOISOMERASE I T. aestivum v2.2 5788   ta_iwgsc_7al_v1_4514745: 189-5976
Traes_7DL_EA65A81E5 (1 of 7) PTHR10290 - DNA TOPOISOMERASE I T. aestivum v2.2 7421   ta_iwgsc_7dl_v1_3377554: 2431-9851

89 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT5G55310.1 A. thaliana TAIR10 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Thhalv10012622m E. salsugineum v1.0 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Lus10043175 L. usitatissimum v1.0 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Gorai.007G311800.1 G. raimondii v2.1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Cagra.2897s0015.1.p C. grandiflora v1.1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Migut.K00523.1.p M. guttatus v2.0 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Glyma.12G013600.1.p G. max Wm82.a2.v1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00059.214 A. trichopoda v1.0 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Traes_7DL_EA65A81E5.2 T. aestivum v2.2 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Traes_7AL_2FF05F9D1.2 T. aestivum v2.2 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Eucgr.C00402.1.p E. grandis v2.0 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
GSMUA_Achr4P19340_001 M. acuminata v1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
GSMUA_Achr1P19510_001 M. acuminata v1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Manes.03G135300.1.p M. esculenta v6.1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Kalax.0589s0017.1.p K. laxiflora v1.1 122043821 DNA topoisomerase I alpha 4 5273 Angiosperm
Kalax.0372s0002.1.p K. laxiflora v1.1 122043821 DNA topoisomerase I alpha 4 5273 Angiosperm
Seita.6G059100.1.p S. italica v2.2 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Bradi3g16920.1.p B. distachyon v3.1 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Brast03G014600.1.p B. stacei v1.1 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Aco013563.1 A. comosus v3 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Aco008016.1 A. comosus v3 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Aqcoe7G070800.1.p A. coerulea v3.1 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
LOC_Os08g05840.1 O. sativa v7.0 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Zosma8g01920.1 Z. marina v2.2 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
AL8G30850.t1 A. lyrata v2.1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Tp57577_TGAC_v2_mRNA23256 T. pratense v2 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Tp57577_TGAC_v2_mRNA10163 T. pratense v2 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
AUR62019348-RA C. quinoa v1.0 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm
Zm00008a015566_P01 Z. mays PH207 v1.1 122043821 DNA topoisomerase I alpha 1 5273 Angiosperm
Potri.011G092700.5.p P. trichocarpa v3.1 122043821 DNA topoisomerase I alpha 2 5273 Angiosperm