Gene : Cagra.2897s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10290 - DNA TOPOISOMERASE I Genomic Order:  17
Name:  ? Cagra.2897s0017 Secondary Identifier:  ? PAC:28905338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2897s0017 0.5kb upstream 0.5kb upstream 5615 true Scaffold2897: 46150-51764 Capsella grandiflora
Cagra.2897s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold2897: 46150-46649 Capsella grandiflora
Cagra.2897s0017 0.5kb downstream 0.5kb downstream 5615 true Scaffold2897: 46650-52264 Capsella grandiflora
Cagra.2897s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold2897: 51765-52264 Capsella grandiflora
Cagra.2897s0017 1.0kb upstream 1.0kb upstream 6115 true Scaffold2897: 45650-51764 Capsella grandiflora
Cagra.2897s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold2897: 45650-46649 Capsella grandiflora
Cagra.2897s0017 1.0kb downstream 1.0kb downstream 6115 true Scaffold2897: 46650-52764 Capsella grandiflora
Cagra.2897s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold2897: 51765-52764 Capsella grandiflora
Cagra.2897s0017 2.0kb upstream 2.0kb upstream 7115 true Scaffold2897: 44650-51764 Capsella grandiflora
Cagra.2897s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold2897: 44650-46649 Capsella grandiflora
Cagra.2897s0017 2.0kb downstream 2.0kb downstream 7115 true Scaffold2897: 46650-53764 Capsella grandiflora
Cagra.2897s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold2897: 51765-53764 Capsella grandiflora
Cagra.2897s0017 5.0kb upstream 5.0kb upstream 10115 true Scaffold2897: 41650-51764 Capsella grandiflora
Cagra.2897s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold2897: 41650-46649 Capsella grandiflora
Cagra.2897s0017 5.0kb downstream 5.0kb downstream 10115 true Scaffold2897: 46650-56764 Capsella grandiflora
Cagra.2897s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold2897: 51765-56764 Capsella grandiflora
Cagra.2897s0017 10.0kb upstream 10.0kb upstream 15115 true Scaffold2897: 36650-51764 Capsella grandiflora
Cagra.2897s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold2897: 36650-46649 Capsella grandiflora
Cagra.2897s0017 10.0kb downstream 10.0kb downstream 15115 true Scaffold2897: 46650-61764 Capsella grandiflora
Cagra.2897s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold2897: 51765-61764 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362633 5261 Brassicaceae View MSA
123838177 5264 Brassicales-Malvales View MSA
124345906 5266 SBM View MSA
124237608 5268 Malvidae View MSA
124069398 5270 Rosid View MSA
123742163 5271 Pentapetalae View MSA
122793496 5272 Eudicot View MSA
122043821 5273 Angiosperm View MSA
121346629 5274 Embryophyte View MSA
123428492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain