Protein Family : DNA topoisomerase I alpha 123428492

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  116

116 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27613.t000003 (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) R. communis v0.1 5624   27613: 17351-22974
Cucsa.042470 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. sativus v1.0 7125   scaffold00540: 869352-876476
orange1.1g002260m.g (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. sinensis v1.1 8347   scaffold00049: 384349-392695
AT5G55310 (1 of 2) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) A. thaliana TAIR10 TOP1BETA 4901   Chr5: 22430176-22435076
AT5G55300 (1 of 2) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) A. thaliana TAIR10 TOP1ALPHA 4926   Chr5: 22424577-22429502
Thhalv10012622m.g (1 of 2) PTHR10290 - DNA TOPOISOMERASE I E. salsugineum v1.0 5201   scaffold_2: 10473952-10479152
Thhalv10012607m.g (1 of 2) PTHR10290 - DNA TOPOISOMERASE I E. salsugineum v1.0 5180   scaffold_2: 10480370-10485549
Ciclev10007398m.g (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. clementina v1.0 8401   scaffold_1: 22915349-22923749
Lus10032571.g (1 of 5) PTHR10290 - DNA TOPOISOMERASE I L. usitatissimum v1.0 4964   scaffold140: 800965-805928
Lus10043175.g (1 of 5) PTHR10290 - DNA TOPOISOMERASE I L. usitatissimum v1.0 6193   scaffold25: 1593139-1599331
Lus10043172.g (1 of 5) PTHR10290 - DNA TOPOISOMERASE I L. usitatissimum v1.0 9837   scaffold25: 1577198-1587034
Gorai.009G444700 (1 of 2) PTHR10290 - DNA TOPOISOMERASE I G. raimondii v2.1 6628   Chr09: 69579520-69586147
Gorai.007G311800 (1 of 2) PTHR10290 - DNA TOPOISOMERASE I G. raimondii v2.1 6651   Chr07: 52561626-52568276
e_gw1.7.32.1 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I C. subellipsoidea C-169 v2.0 6445   scaffold_7: 2198864-2205308
MicpuC2.EuGene.0000010192 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I M. pusilla CCMP1545 v3.0 2058   scaffold_1: 400328-402385
MSI_PierreAnnot2.00107 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I M. sp RCC299 v3.0 1908   Chr_01: 370484-372391
fgenesh1_pg.C_Chr_12000153 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I O. lucimarinus v2.0 1476   Chr_12: 328612-330087
Thecc1EG030764 (1 of 1) K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1) T. cacao v1.1 7813   scaffold_7: 1254524-1262336
Migut.K00523 (1 of 1) PTHR10290 - DNA TOPOISOMERASE I M. guttatus v2.0 6999   scaffold_11: 2685601-2692599
Araha.28833s0005 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I A. halleri v1.1 5012   Scaffold28833: 21665-26676
Araha.28833s0004 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I A. halleri v1.1 4921   Scaffold28833: 16095-21015
Cagra.1696s0013 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I C. grandiflora v1.1 3882   Scaffold1696: 52074-55955
Cagra.2897s0015 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I C. grandiflora v1.1 5083   Scaffold2897: 38539-43621
Cagra.2897s0017 (1 of 3) PTHR10290 - DNA TOPOISOMERASE I C. grandiflora v1.1 5115   Scaffold2897: 46650-51764
Glyma.09G223300 (1 of 2) PTHR10290:SF3 - DNA TOPOISOMERASE 1 G. max Wm82.a2.v1 9280   Chr09: 44366083-44375362
Glyma.12G013600 (1 of 2) PTHR10290:SF3 - DNA TOPOISOMERASE 1 G. max Wm82.a2.v1 8521   Chr12: 980833-989353
Brara.A01658 (1 of 4) PTHR10290 - DNA TOPOISOMERASE I B. rapa FPsc v1.3 3603   A01: 9288273-9291875
Brara.B01329 (1 of 1) PF01028//PF02919 - Eukaryotic DNA topoisomerase I, catalytic core (Topoisom_I) // Eukaryotic DNA topoisomerase I, DNA binding fragment (Topoisom_I_N) B. rapa FPsc v1.3 2400   A02: 6999845-7002244
Brara.B01330 (1 of 4) PTHR10290 - DNA TOPOISOMERASE I B. rapa FPsc v1.3 5072   A02: 7004194-7009265
Brara.J00978 (1 of 4) PTHR10290 - DNA TOPOISOMERASE I B. rapa FPsc v1.3 4495   A10: 9713679-9718173

116 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27613.m000610 R. communis v0.1 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
Cucsa.042470.1 C. sativus v1.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
orange1.1g002260m C. sinensis v1.1 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
AT5G55310.1 A. thaliana TAIR10 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
AT5G55300.2 A. thaliana TAIR10 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Thhalv10012622m E. salsugineum v1.0 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Thhalv10012607m E. salsugineum v1.0 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Ciclev10007398m C. clementina v1.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
Lus10032571 L. usitatissimum v1.0 123428492 DNA topoisomerase I alpha 3 5275 Viridiplantae
Lus10043175 L. usitatissimum v1.0 123428492 DNA topoisomerase I alpha 3 5275 Viridiplantae
Lus10043172 L. usitatissimum v1.0 123428492 DNA topoisomerase I alpha 3 5275 Viridiplantae
Gorai.007G311800.1 G. raimondii v2.1 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Gorai.009G444700.1 G. raimondii v2.1 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
15325 C. subellipsoidea C-169 v2.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
49968 M. pusilla CCMP1545 v3.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
113917 M. sp RCC299 v3.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
17621 O. lucimarinus v2.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
Thecc1EG030764t1 T. cacao v1.1 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
Migut.K00523.1.p M. guttatus v2.0 123428492 DNA topoisomerase I alpha 1 5275 Viridiplantae
Araha.28833s0004.1.p A. halleri v1.1 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Araha.28833s0005.1.p A. halleri v1.1 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Cagra.1696s0013.1.p C. grandiflora v1.1 123428492 DNA topoisomerase I alpha 3 5275 Viridiplantae
Cagra.2897s0017.1.p C. grandiflora v1.1 123428492 DNA topoisomerase I alpha 3 5275 Viridiplantae
Cagra.2897s0015.1.p C. grandiflora v1.1 123428492 DNA topoisomerase I alpha 3 5275 Viridiplantae
Glyma.12G013600.1.p G. max Wm82.a2.v1 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Glyma.09G223300.1.p G. max Wm82.a2.v1 123428492 DNA topoisomerase I alpha 2 5275 Viridiplantae
Brara.B01329.1.p B. rapa FPsc v1.3 123428492 DNA topoisomerase I alpha 4 5275 Viridiplantae
Brara.A01658.1.p B. rapa FPsc v1.3 123428492 DNA topoisomerase I alpha 4 5275 Viridiplantae
Brara.J00978.1.p B. rapa FPsc v1.3 123428492 DNA topoisomerase I alpha 4 5275 Viridiplantae
Brara.B01330.1.p B. rapa FPsc v1.3 123428492 DNA topoisomerase I alpha 4 5275 Viridiplantae