Gene : Lus10043172.g L. usitatissimum v1.0

Defline:  (1 of 5) PTHR10290 - DNA TOPOISOMERASE I Genomic Order:  238
Name:  ? Lus10043172.g Secondary Identifier:  ? PAC:23167928

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10043172.g 0.5kb upstream 0.5kb upstream 10337 true scaffold25: 1576698-1587034 Linum usitatissimum
Lus10043172.g 0.5kb upstream 0.5kb upstream 500 false scaffold25: 1576698-1577197 Linum usitatissimum
Lus10043172.g 0.5kb downstream 0.5kb downstream 10337 true scaffold25: 1577198-1587534 Linum usitatissimum
Lus10043172.g 0.5kb downstream 0.5kb downstream 500 false scaffold25: 1587035-1587534 Linum usitatissimum
Lus10043172.g 1.0kb upstream 1.0kb upstream 10837 true scaffold25: 1576198-1587034 Linum usitatissimum
Lus10043172.g 1.0kb upstream 1.0kb upstream 1000 false scaffold25: 1576198-1577197 Linum usitatissimum
Lus10043172.g 1.0kb downstream 1.0kb downstream 10837 true scaffold25: 1577198-1588034 Linum usitatissimum
Lus10043172.g 1.0kb downstream 1.0kb downstream 1000 false scaffold25: 1587035-1588034 Linum usitatissimum
Lus10043172.g 2.0kb upstream 2.0kb upstream 11837 true scaffold25: 1575198-1587034 Linum usitatissimum
Lus10043172.g 2.0kb upstream 2.0kb upstream 2000 false scaffold25: 1575198-1577197 Linum usitatissimum
Lus10043172.g 2.0kb downstream 2.0kb downstream 11837 true scaffold25: 1577198-1589034 Linum usitatissimum
Lus10043172.g 2.0kb downstream 2.0kb downstream 2000 false scaffold25: 1587035-1589034 Linum usitatissimum
Lus10043172.g 5.0kb upstream 5.0kb upstream 14837 true scaffold25: 1572198-1587034 Linum usitatissimum
Lus10043172.g 5.0kb upstream 5.0kb upstream 5000 false scaffold25: 1572198-1577197 Linum usitatissimum
Lus10043172.g 5.0kb downstream 5.0kb downstream 14837 true scaffold25: 1577198-1592034 Linum usitatissimum
Lus10043172.g 5.0kb downstream 5.0kb downstream 5000 false scaffold25: 1587035-1592034 Linum usitatissimum
Lus10043172.g 10.0kb upstream 10.0kb upstream 19837 true scaffold25: 1567198-1587034 Linum usitatissimum
Lus10043172.g 10.0kb upstream 10.0kb upstream 10000 false scaffold25: 1567198-1577197 Linum usitatissimum
Lus10043172.g 10.0kb downstream 10.0kb downstream 19837 true scaffold25: 1577198-1597034 Linum usitatissimum
Lus10043172.g 10.0kb downstream 10.0kb downstream 10000 false scaffold25: 1587035-1597034 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122417988 5262 Malpighiales Singleton cluster - no MSA
124210640 5268 Malvidae Singleton cluster - no MSA
124041467 5270 Rosid View MSA
123612293 5271 Pentapetalae View MSA
122646802 5272 Eudicot View MSA
122051267 5273 Angiosperm View MSA
121312384 5274 Embryophyte View MSA
123428492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain