Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 123747104

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  51

51 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28462.t000001 (1 of 2) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) R. communis v0.1 5203   28462: 12635-17837
Cucsa.317370 (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F C. sativus v1.0 4209   scaffold03052: 49188-53396
orange1.1g023559m.g (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. sinensis v1.1 5224   scaffold00274: 13375-18598
AT5G04280 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 3389   Chr5: 1192274-1195662
AT1G60650 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) A. thaliana TAIR10 2529   Chr1: 22339809-22342337
Thhalv10023624m.g (1 of 10) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) E. salsugineum v1.0 2808   scaffold_8: 3909026-3911833
Ciclev10032520m.g (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F C. clementina v1.0 5337   scaffold_4: 6975583-6980919
Lus10038683.g (1 of 14) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) L. usitatissimum v1.0 1107   scaffold37: 1598021-1599127
Lus10037950.g (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains L. usitatissimum v1.0 1976   scaffold475: 532820-534795
Lus10000128.g (1 of 14) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) L. usitatissimum v1.0 582   C8353861: 41-622
Gorai.011G235100 (1 of 8) KOG0114 - Predicted RNA-binding protein (RRM superfamily) G. raimondii v2.1 4573   Chr11: 55510374-55514946
Thecc1EG043324 (1 of 1) PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4F T. cacao v1.1 6504   scaffold_10r: 5245264-5251767
Migut.F01713 (1 of 8) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) M. guttatus v2.0 4197   scaffold_6: 16933576-16937772
Araha.0034s0005 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. halleri v1.1 3362   Scaffold34: 25798-29159
Araha.9271s0004 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains A. halleri v1.1 2459   Scaffold9271: 9153-11611
Cagra.9217s0008 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. grandiflora v1.1 3352   Scaffold9217: 30336-33687
Cagra.12428s0007 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains C. grandiflora v1.1 2409   Scaffold12428: 28689-31097
Glyma.20G113200 (1 of 1) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains G. max Wm82.a2.v1 5503   Chr20: 35520303-35525805
Brara.C00156 (1 of 14) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) B. rapa FPsc v1.3 3098   A03: 697430-700527
Bostr.2128s0019 (1 of 2) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains B. stricta v1.2 3500   Scaffold2128: 102060-105559
Bostr.10040s0149 (1 of 1) KOG0107//KOG0109 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains B. stricta v1.2 2391   Scaffold10040: 1295890-1298280
SapurV1A.0213s0230 (1 of 1) PTHR24012//PTHR24012:SF459 - FAMILY NOT NAMED // RNA-BINDING PROTEIN 4F S. purpurea v1.0 5164   chr10: 17751018-17756181
SapurV1A.0411s0100 (1 of 3) K12885 - heterogeneous nuclear ribonucleoprotein G (RBMX, HNRNPG) S. purpurea v1.0 4768   chr08: 1814859-1819626
Eucgr.J01044 (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F E. grandis v2.0 6163   Chr10: 11410420-11416582
Prupe.2G206800 (1 of 1) PTHR24012:SF459 - RNA-BINDING PROTEIN 4F P. persica v2.1 4831   Pp02: 24087963-24092793
Manes.10G051200 (1 of 10) PF00076//PF00098 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Zinc knuckle (zf-CCHC) M. esculenta v6.1 900   Chromosome10: 5011692-5012591
Kalax.0139s0055 (1 of 5) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains K. laxiflora v1.1 4975   scaffold_139: 414867-419841
Kalax.0199s0029 (1 of 5) KOG0109 - RNA-binding protein LARK, contains RRM and retroviral-type Zn-finger domains K. laxiflora v1.1 5107   scaffold_199: 204888-209994
Kalax.0286s0014 (1 of 28) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) K. laxiflora v1.1 2045   scaffold_286: 182588-184632
Kalax.0483s0019 (1 of 1) PTHR24012:SF31 - POLY(U)-BINDING-SPLICING FACTOR HALF PINT K. laxiflora v1.1 6354   scaffold_483: 173282-179635

51 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
28462.m000127 R. communis v0.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
AT1G60650.1 A. thaliana TAIR10 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Thhalv10023624m E. salsugineum v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Lus10037950 L. usitatissimum v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5271 Pentapetalae
Araha.9271s0004.1.p A. halleri v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Cagra.9217s0008.1.p C. grandiflora v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Brara.C00156.1.p B. rapa FPsc v1.3 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Bostr.2128s0019.1.p B. stricta v1.2 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
SapurV1A.0213s0230.1.p S. purpurea v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
SapurV1A.0411s0100.1.p S. purpurea v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Eucgr.J01044.1.p E. grandis v2.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Kalax.0139s0055.1.p K. laxiflora v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5271 Pentapetalae
Kalax.0483s0019.1.p K. laxiflora v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5271 Pentapetalae
Kalax.0286s0014.1.p K. laxiflora v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 4 5271 Pentapetalae
DCAR_006405 D. carota v2.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
AUR62042058-RA C. quinoa v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Podel.10G234600.1.p P. deltoides WV94 v2.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
PGSC0003DMP400029569 S. tuberosum v4.03 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Oeu007407.1 O. europaea v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
VIT_213s0019g05080.2 V. vinifera v2.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Lsat_1_v5_gn_2_113200.1 L. sativa V8 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Carub.0002s0468.1.p C. rubella v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Cucsa.317370.1 C. sativus v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
orange1.1g023559m C. sinensis v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
AT5G04280.1 A. thaliana TAIR10 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 2 5271 Pentapetalae
Ciclev10032520m C. clementina v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Lus10038683 L. usitatissimum v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5271 Pentapetalae
Lus10000128 L. usitatissimum v1.0 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 3 5271 Pentapetalae
Gorai.011G235100.1 G. raimondii v2.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae
Thecc1EG043324t1 T. cacao v1.1 123747104 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain 1 5271 Pentapetalae