Protein Family : 2.7.7.49 - RNA-directed DNA polymerase / Revertase 124073483

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  76

76 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Thhalv10023107m.g (1 of 3) PF00098//PF14223 - Zinc knuckle (zf-CCHC) // gag-polypeptide of LTR copia-type (UBN2) E. salsugineum v1.0 834   scaffold_11: 3960306-3961139
Thhalv10002214m.g (1 of 3) PF00098//PF14223 - Zinc knuckle (zf-CCHC) // gag-polypeptide of LTR copia-type (UBN2) E. salsugineum v1.0 699   scaffold_12: 394989-395687
Thhalv10000595m.g (1 of 1) PTHR11439//PTHR11439:SF188 - GAG-POL-RELATED RETROTRANSPOSON E. salsugineum v1.0 738   scaffold_15: 4223462-4224199
Thhalv10000703m.g (1 of 33) 2.7.7.49 - RNA-directed DNA polymerase / Revertase E. salsugineum v1.0 525   scaffold_15: 5694801-5695325
Thhalv10011059m.g (1 of 33) 2.7.7.49 - RNA-directed DNA polymerase / Revertase E. salsugineum v1.0 372   scaffold_16: 4619079-4619450
Thhalv10003344m.g (1 of 33) 2.7.7.49 - RNA-directed DNA polymerase / Revertase E. salsugineum v1.0 963   scaffold_17: 4526790-4527752
Thhalv10029300m.g (1 of 33) 2.7.7.49 - RNA-directed DNA polymerase / Revertase E. salsugineum v1.0 363   scaffold_3: 7978258-7978620
Ciclev10003098m.g (1 of 12) 2.7.7.49 - RNA-directed DNA polymerase / Revertase C. clementina v1.0 654   scaffold_5: 13870436-13871089
Ciclev10023471m.g (1 of 12) 2.7.7.49 - RNA-directed DNA polymerase / Revertase C. clementina v1.0 558   scaffold_3: 32030323-32030880
Gorai.008G089200 (1 of 10) 2.7.7.49 - RNA-directed DNA polymerase / Revertase G. raimondii v2.1 495   Chr08: 20526259-20526753
Thecc1EG024518 (1 of 2) PF00098//PF14223 - Zinc knuckle (zf-CCHC) // gag-polypeptide of LTR copia-type (UBN2) T. cacao v1.1 3494   scaffold_5: 26287681-26291174
Cagra.20508s0001 (1 of 16) 2.7.7.49 - RNA-directed DNA polymerase / Revertase C. grandiflora v1.1 840   Scaffold20508: 246-1085
Brara.F01953 (1 of 10) 2.7.7.49 - RNA-directed DNA polymerase / Revertase B. rapa FPsc v1.3 2118   A06: 14639368-14641485
Bostr.10040s0285 (1 of 12) 2.7.7.49 - RNA-directed DNA polymerase / Revertase B. stricta v1.2 730   Scaffold10040: 2626041-2626770
Bostr.12645s0019 (1 of 12) 2.7.7.49 - RNA-directed DNA polymerase / Revertase B. stricta v1.2 1585   Scaffold12645: 122749-124333
Medtr1g057430 (1 of 138) 2.7.7.49 - RNA-directed DNA polymerase / Revertase M. truncatula Mt4.0v1 495   chr1: 25250581-25251075
Medtr2g038180 (1 of 138) 2.7.7.49 - RNA-directed DNA polymerase / Revertase M. truncatula Mt4.0v1 252   chr2: 16602070-16602321
Medtr2g029310   M. truncatula Mt4.0v1 1635   chr2: 10948009-10949643
Medtr3g069560   M. truncatula Mt4.0v1 369   chr3: 31116177-31116545
Medtr4g033005 (1 of 138) 2.7.7.49 - RNA-directed DNA polymerase / Revertase M. truncatula Mt4.0v1 2933   chr4: 11435494-11438426
Medtr3g463880 (1 of 138) 2.7.7.49 - RNA-directed DNA polymerase / Revertase M. truncatula Mt4.0v1 453   chr3: 25634340-25634792
Medtr4g091710   M. truncatula Mt4.0v1 582   chr4: 36378847-36379428
Medtr5g099435   M. truncatula Mt4.0v1 210   chr5: 43609258-43609467
Medtr5g099425   M. truncatula Mt4.0v1 210   chr5: 43603766-43603975
Medtr6g045657 (1 of 138) 2.7.7.49 - RNA-directed DNA polymerase / Revertase M. truncatula Mt4.0v1 204   chr6: 16555302-16555505
Medtr0127s0030 (1 of 138) 2.7.7.49 - RNA-directed DNA polymerase / Revertase M. truncatula Mt4.0v1 2169   scaffold0127: 10501-12669
SapurV1A.0387s0090 (1 of 36) 2.7.7.49 - RNA-directed DNA polymerase / Revertase S. purpurea v1.0 843   chr11: 2567561-2568403
SapurV1A.0312s0180 (1 of 11) PTHR11439//PTHR11439:SF188 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED S. purpurea v1.0 918   chr17: 2809688-2810605
SapurV1A.0246s0190 (1 of 36) 2.7.7.49 - RNA-directed DNA polymerase / Revertase S. purpurea v1.0 801   chr18: 7449528-7450328
Eucgr.A00533 (1 of 28) 2.7.7.49 - RNA-directed DNA polymerase / Revertase E. grandis v2.0 267   Chr01: 16970958-16971224

76 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10029300m E. salsugineum v1.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 7 5270 Rosid
Thhalv10002214m E. salsugineum v1.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 7 5270 Rosid
Thhalv10023107m E. salsugineum v1.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 7 5270 Rosid
Thhalv10011059m E. salsugineum v1.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 7 5270 Rosid
Thhalv10000703m E. salsugineum v1.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 7 5270 Rosid
Thecc1EG024518t1 T. cacao v1.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5270 Rosid
Cagra.20508s0001.1.p C. grandiflora v1.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5270 Rosid
Bostr.12645s0019.1.p B. stricta v1.2 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 2 5270 Rosid
Medtr2g038180.1 M. truncatula Mt4.0v1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 11 5270 Rosid
Medtr5g099435.1 M. truncatula Mt4.0v1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 11 5270 Rosid
SapurV1A.0312s0180.1.p S. purpurea v1.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
Eucgr.E00678.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.E03583.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.J01783.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.C02266.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.C01549.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.C01974.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.H03406.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.D00292.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.D00985.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.D01009.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Eucgr.L01466.1.p E. grandis v2.0 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 26 5270 Rosid
Prupe.4G233400.1.p P. persica v2.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
Prupe.1G258000.1.p P. persica v2.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
Manes.15G008200.1.p M. esculenta v6.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 1 5270 Rosid
Phvul.010G009700.1.p P. vulgaris v2.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
Phvul.010G010700.1.p P. vulgaris v2.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
Phvul.008G188600.1.p P. vulgaris v2.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
Potri.017G081200.1.p P. trichocarpa v3.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 3 5270 Rosid
VIT_205s0062g00060.1 V. vinifera v2.1 124073483 2.7.7.49 - RNA-directed DNA polymerase / Revertase 2 5270 Rosid