Protein Family : retrotransposon protein, putative, unclassified, expressed 124576507

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  11

11 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Seita.2G142000 (1 of 3) PTHR23002:SF54 - CCHC-TYPE ZINC KNUCKLE PROTEIN-RELATED S. italica v2.2 1755   scaffold_2: 16914530-16916284
Seita.2G146200 (1 of 45) PF00098 - Zinc knuckle (zf-CCHC) S. italica v2.2 3078   scaffold_2: 18350500-18353577
LOC_Os11g19100 (1 of 3) PTHR23002//PTHR23002:SF54 - ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN // CCHC-TYPE ZINC KNUCKLE PROTEIN-RELATED O. sativa v7.0 5811   Chr11: 10887087-10892897
LOC_Os06g32770 (1 of 15) PTHR10178 - GAG/POL/ENV POLYPROTEIN O. sativa v7.0 2318   Chr6: 19056107-19058424
Pavir.2NG296000 (1 of 3) PTHR23002:SF54 - CCHC-TYPE ZINC KNUCKLE PROTEIN-RELATED P. virgatum v4.1 5378   Chr02N: 61618360-61623737
Pavir.2KG257900   P. virgatum v4.1 6622   Chr02K: 49379348-49385969
Sobic.001G384900 (1 of 3) K09250 - cellular nucleic acid-binding protein (CNBP) S. bicolor v3.1.1 4657   Chr01: 67248888-67253544
MisinT433700 (1 of 3) PTHR23002//PTHR23002:SF54 - ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN // CCHC-TYPE ZINC KNUCKLE PROTEIN-RELATED M. sinensis v7.1 1287   scaffold01461: 18210-19496
MisinT503600   M. sinensis v7.1 3914   scaffold02059: 23281-27194
OsKitaake11g107500 (1 of 2) PTHR23002//PTHR23002:SF54 - ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN // CCHC-TYPE ZINC KNUCKLE PROTEIN-RELATED O. sativa Kitaake v3.1 5797   Chr11: 11208944-11214740
Sevir.2G152700 (1 of 40) PF00098 - Zinc knuckle (zf-CCHC) S. viridis v2.1 3101   Chr_02: 17502462-17505562

11 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Seita.2G146200.1.p S. italica v2.2 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
Seita.2G142000.1.p S. italica v2.2 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
LOC_Os06g32770.1 O. sativa v7.0 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
LOC_Os11g19100.2 O. sativa v7.0 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
Pavir.2KG257900.1.p P. virgatum v4.1 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
Pavir.2NG296000.1.p P. virgatum v4.1 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
MisinT503600.1.p M. sinensis v7.1 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
MisinT433700.1.p M. sinensis v7.1 124576507 retrotransposon protein, putative, unclassified, expressed 2 5269 Grass
OsKitaake11g107500.1.p O. sativa Kitaake v3.1 124576507 retrotransposon protein, putative, unclassified, expressed 1 5269 Grass
Sevir.2G152700.1.p S. viridis v2.1 124576507 retrotransposon protein, putative, unclassified, expressed 1 5269 Grass
Sobic.001G384900.2.p S. bicolor v3.1.1 124576507 retrotransposon protein, putative, unclassified, expressed 1 5269 Grass