Protein Family : silencing defective 5 124253207

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  32

32 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29851.t000046 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 R. communis v0.1 8504   29851: 263901-272404
29953.t000005 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 R. communis v0.1 6256   29953: 50520-56775
orange1.1g010944m.g (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 C. sinensis v1.1 6060   scaffold00010: 2094837-2100896
AT3G15390 (1 of 1) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 A. thaliana TAIR10 SDE5 3816   Chr3: 5196522-5200337
Thhalv10020594m.g (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 E. salsugineum v1.0 4180   scaffold_13: 4186675-4190854
Ciclev10014995m.g (1 of 7) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 C. clementina v1.0 6293   scaffold_2: 33339098-33345390
Lus10025646.g (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 L. usitatissimum v1.0 4194   scaffold145: 805826-810019
Lus10018188.g (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 L. usitatissimum v1.0 3664   scaffold112: 640772-644435
Gorai.002G072300 (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 G. raimondii v2.1 6615   Chr02: 8457581-8464195
Gorai.006G087000 (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 G. raimondii v2.1 4231   Chr06: 32131990-32136220
Gorai.011G027100 (1 of 4) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 G. raimondii v2.1 4418   Chr11: 1992704-1997121
Thecc1EG029888 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 T. cacao v1.1 6982   scaffold_6: 24785646-24792627
Thecc1EG031420 (1 of 2) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 T. cacao v1.1 7628   scaffold_7: 4823744-4831371
Araha.1906s0016 (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 A. halleri v1.1 2604   Scaffold1906: 55068-57671
Cagra.0007s0088 (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 C. grandiflora v1.1 2974   Scaffold7: 298971-301944
Brara.A03138 (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 B. rapa FPsc v1.3 3241   A01: 26393984-26397224
Brara.E02599 (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 B. rapa FPsc v1.3 4050   A05: 22951498-22955547
Bostr.28625s0161 (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 B. stricta v1.2 2955   Scaffold28625: 866279-869233
SapurV1A.0032s0080 (1 of 3) PTHR13308//PTHR13308:SF17 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 S. purpurea v1.0 7283   chr11: 3507313-3514595
Manes.03G112100 (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 M. esculenta v6.1 7386   Chromosome03: 20823843-20831228
Manes.17G044200 (1 of 7) PF08590 - Domain of unknown function (DUF1771) M. esculenta v6.1 8145   Chromosome17: 17872486-17880630
AL230U10030 (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 A. lyrata v2.1 3576   scaffold_230: 3796-7371
AL3G27930 (1 of 2) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 A. lyrata v2.1 3738   scaffold_3: 6455409-6459146
Potri.001G401900 (1 of 3) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. trichocarpa v3.1 5044   Chr01: 42317770-42322813
Potri.004G042100 (1 of 3) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. trichocarpa v3.1 7337   Chr04: 3206106-3213442
Potri.011G051300 (1 of 3) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. trichocarpa v3.1 7271   Chr11: 4404861-4412131
Podel.04G044000 (1 of 7) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. deltoides WV94 v2.1 7232   Chr04: 3627987-3635218
Podel.01G424900 (1 of 7) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. deltoides WV94 v2.1 5073   Chr01: 45685731-45690803
Podel.01G426500 (1 of 7) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. deltoides WV94 v2.1 5038   Chr01: 45835014-45840051
Podel.01G428700 (1 of 7) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 P. deltoides WV94 v2.1 5056   Chr01: 46078993-46084048

32 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Lus10018188 L. usitatissimum v1.0 124253207 silencing defective 5 2 5268 Malvidae
Gorai.011G027100.1 G. raimondii v2.1 124253207 silencing defective 5 3 5268 Malvidae
Thecc1EG029888t2 T. cacao v1.1 124253207 silencing defective 5 2 5268 Malvidae
Araha.1906s0016.1.p A. halleri v1.1 124253207 silencing defective 5 1 5268 Malvidae
Brara.E02599.1.p B. rapa FPsc v1.3 124253207 silencing defective 5 2 5268 Malvidae
Potri.004G042100.7.p P. trichocarpa v3.1 124253207 silencing defective 5 3 5268 Malvidae
Potri.001G401900.2.p P. trichocarpa v3.1 124253207 silencing defective 5 3 5268 Malvidae
Podel.04G044000.1.p P. deltoides WV94 v2.1 124253207 silencing defective 5 5 5268 Malvidae
Podel.01G426500.1.p P. deltoides WV94 v2.1 124253207 silencing defective 5 5 5268 Malvidae
Podel.01G424900.1.p P. deltoides WV94 v2.1 124253207 silencing defective 5 5 5268 Malvidae
29953.m000428 R. communis v0.1 124253207 silencing defective 5 2 5268 Malvidae
29851.m002404 R. communis v0.1 124253207 silencing defective 5 2 5268 Malvidae
orange1.1g010944m C. sinensis v1.1 124253207 silencing defective 5 1 5268 Malvidae
AT3G15390.1 A. thaliana TAIR10 124253207 silencing defective 5 1 5268 Malvidae
Thhalv10020594m E. salsugineum v1.0 124253207 silencing defective 5 1 5268 Malvidae
Ciclev10014995m C. clementina v1.0 124253207 silencing defective 5 1 5268 Malvidae
Lus10025646 L. usitatissimum v1.0 124253207 silencing defective 5 2 5268 Malvidae
Gorai.006G087000.1 G. raimondii v2.1 124253207 silencing defective 5 3 5268 Malvidae
Gorai.002G072300.1 G. raimondii v2.1 124253207 silencing defective 5 3 5268 Malvidae
Thecc1EG031420t1 T. cacao v1.1 124253207 silencing defective 5 2 5268 Malvidae
Cagra.0007s0088.1.p C. grandiflora v1.1 124253207 silencing defective 5 1 5268 Malvidae
Brara.A03138.1.p B. rapa FPsc v1.3 124253207 silencing defective 5 2 5268 Malvidae
Bostr.28625s0161.1.p B. stricta v1.2 124253207 silencing defective 5 1 5268 Malvidae
SapurV1A.0032s0080.1.p S. purpurea v1.0 124253207 silencing defective 5 1 5268 Malvidae
Manes.03G112100.1.p M. esculenta v6.1 124253207 silencing defective 5 2 5268 Malvidae
Manes.17G044200.1.p M. esculenta v6.1 124253207 silencing defective 5 2 5268 Malvidae
AL230U10030.t1 A. lyrata v2.1 124253207 silencing defective 5 2 5268 Malvidae
AL3G27930.t3 A. lyrata v2.1 124253207 silencing defective 5 2 5268 Malvidae
Potri.011G051300.1.p P. trichocarpa v3.1 124253207 silencing defective 5 3 5268 Malvidae
Podel.01G428700.1.p P. deltoides WV94 v2.1 124253207 silencing defective 5 5 5268 Malvidae