Gene : Cagra.0007s0088 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13308:SF17 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  88
Name:  ? Cagra.0007s0088 Secondary Identifier:  ? PAC:28903186
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0007s0088 0.5kb upstream 0.5kb upstream 3474 true Scaffold7: 298971-302444 Capsella grandiflora
Cagra.0007s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold7: 301945-302444 Capsella grandiflora
Cagra.0007s0088 0.5kb downstream 0.5kb downstream 3474 true Scaffold7: 298471-301944 Capsella grandiflora
Cagra.0007s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold7: 298471-298970 Capsella grandiflora
Cagra.0007s0088 1.0kb upstream 1.0kb upstream 3974 true Scaffold7: 298971-302944 Capsella grandiflora
Cagra.0007s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold7: 301945-302944 Capsella grandiflora
Cagra.0007s0088 1.0kb downstream 1.0kb downstream 3974 true Scaffold7: 297971-301944 Capsella grandiflora
Cagra.0007s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold7: 297971-298970 Capsella grandiflora
Cagra.0007s0088 2.0kb upstream 2.0kb upstream 4974 true Scaffold7: 298971-303944 Capsella grandiflora
Cagra.0007s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold7: 301945-303944 Capsella grandiflora
Cagra.0007s0088 2.0kb downstream 2.0kb downstream 4974 true Scaffold7: 296971-301944 Capsella grandiflora
Cagra.0007s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold7: 296971-298970 Capsella grandiflora
Cagra.0007s0088 5.0kb upstream 5.0kb upstream 7974 true Scaffold7: 298971-306944 Capsella grandiflora
Cagra.0007s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold7: 301945-306944 Capsella grandiflora
Cagra.0007s0088 5.0kb downstream 5.0kb downstream 7974 true Scaffold7: 293971-301944 Capsella grandiflora
Cagra.0007s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold7: 293971-298970 Capsella grandiflora
Cagra.0007s0088 10.0kb upstream 10.0kb upstream 12974 true Scaffold7: 298971-311944 Capsella grandiflora
Cagra.0007s0088 10.0kb upstream 10.0kb upstream 10000 false Scaffold7: 301945-311944 Capsella grandiflora
Cagra.0007s0088 10.0kb downstream 10.0kb downstream 12974 true Scaffold7: 288971-301944 Capsella grandiflora
Cagra.0007s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold7: 288971-298970 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362937 5261 Brassicaceae View MSA
123840076 5264 Brassicales-Malvales View MSA
124345122 5266 SBM View MSA
124253207 5268 Malvidae View MSA
124066526 5270 Rosid View MSA
123744370 5271 Pentapetalae View MSA
122786444 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain