Protein Family : Plant self-incompatibility protein S1 family 124252720

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  139

139 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29904.t000120 (1 of 5) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED R. communis v0.1 580   29904: 850232-850811
29904.t000121 (1 of 5) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED R. communis v0.1 1626   29904: 852155-853780
29904.t000123 (1 of 5) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED R. communis v0.1 420   29904: 859060-859479
29904.t000124 (1 of 5) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED R. communis v0.1 1805   29904: 860588-862392
29923.t000040 (1 of 5) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED R. communis v0.1 402   29923: 350260-350661
30190.t000020 (1 of 32) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) R. communis v0.1 408   30190: 3347918-3348325
orange1.1g043463m.g (1 of 15) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. sinensis v1.1 450   scaffold01286: 17427-17876
orange1.1g038531m.g (1 of 32) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) C. sinensis v1.1 327   scaffold00324: 77525-77851
orange1.1g045924m.g (1 of 15) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. sinensis v1.1 345   scaffold00347: 52109-52453
orange1.1g038489m.g (1 of 15) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. sinensis v1.1 393   scaffold00541: 47904-48296
orange1.1g048586m.g (1 of 32) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) C. sinensis v1.1 988   scaffold00107: 288555-289542
AT4G16195 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 486   Chr4: 9173165-9173650
AT4G24975 (1 of 3) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN A. thaliana TAIR10 408   Chr4: 12843802-12844209
AT4G24973 (1 of 3) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN A. thaliana TAIR10 405   Chr4: 12840970-12841374
AT5G12060 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 453   Chr5: 3894919-3895371
AT5G12070 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 459   Chr5: 3896950-3897408
AT3G17080 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 579   Chr3: 5825289-5825867
AT3G16970 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 423   Chr3: 5793668-5794090
AT1G04645 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 494   Chr1: 1293770-1294263
Thhalv10027197m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 471   scaffold_1: 10863182-10863652
Thhalv10027201m.g (1 of 1) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN E. salsugineum v1.0 402   scaffold_1: 6412017-6412418
Thhalv10022076m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 414   scaffold_13: 3512568-3512981
Thhalv10022192m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 402   scaffold_13: 3558330-3558731
Thhalv10022389m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 402   scaffold_13: 3560818-3561219
Thhalv10015390m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 474   scaffold_2: 3974549-3975022
Thhalv10015241m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 577   scaffold_2: 3975306-3975882
Thhalv10009662m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 333   scaffold_5: 14327295-14327627
Ciclev10023727m.g (1 of 41) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) C. clementina v1.0 366   scaffold_3: 24753302-24753667
Ciclev10006406m.g (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. clementina v1.0 450   scaffold_9: 9092994-9093443
Ciclev10006673m.g (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. clementina v1.0 450   scaffold_9: 9136989-9137438

139 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29923.m000825 R. communis v0.1 124252720 Plant self-incompatibility protein S1 family 6 5268 Malvidae
30190.m010784 R. communis v0.1 124252720 Plant self-incompatibility protein S1 family 6 5268 Malvidae
orange1.1g043463m C. sinensis v1.1 124252720 Plant self-incompatibility protein S1 family 5 5268 Malvidae
orange1.1g048586m C. sinensis v1.1 124252720 Plant self-incompatibility protein S1 family 5 5268 Malvidae
orange1.1g038531m C. sinensis v1.1 124252720 Plant self-incompatibility protein S1 family 5 5268 Malvidae
orange1.1g045924m C. sinensis v1.1 124252720 Plant self-incompatibility protein S1 family 5 5268 Malvidae
AT4G24973.1 A. thaliana TAIR10 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
AT3G17080.1 A. thaliana TAIR10 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
AT5G12060.1 A. thaliana TAIR10 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
Thhalv10022389m E. salsugineum v1.0 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
Thhalv10022192m E. salsugineum v1.0 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
Thhalv10015241m E. salsugineum v1.0 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
Thhalv10015390m E. salsugineum v1.0 124252720 Plant self-incompatibility protein S1 family 8 5268 Malvidae
Ciclev10006461m C. clementina v1.0 124252720 Plant self-incompatibility protein S1 family 6 5268 Malvidae
Lus10011068 L. usitatissimum v1.0 124252720 Plant self-incompatibility protein S1 family 9 5268 Malvidae
Lus10011069 L. usitatissimum v1.0 124252720 Plant self-incompatibility protein S1 family 9 5268 Malvidae
Lus10011753 L. usitatissimum v1.0 124252720 Plant self-incompatibility protein S1 family 9 5268 Malvidae
Lus10030964 L. usitatissimum v1.0 124252720 Plant self-incompatibility protein S1 family 9 5268 Malvidae
Gorai.005G259300.1 G. raimondii v2.1 124252720 Plant self-incompatibility protein S1 family 6 5268 Malvidae
Gorai.006G055500.1 G. raimondii v2.1 124252720 Plant self-incompatibility protein S1 family 6 5268 Malvidae
Thecc1EG006445t1 T. cacao v1.1 124252720 Plant self-incompatibility protein S1 family 2 5268 Malvidae
Araha.16377s0003.1.p A. halleri v1.1 124252720 Plant self-incompatibility protein S1 family 7 5268 Malvidae
Araha.29780s0002.1.p A. halleri v1.1 124252720 Plant self-incompatibility protein S1 family 7 5268 Malvidae
Araha.65480s0001.1.p A. halleri v1.1 124252720 Plant self-incompatibility protein S1 family 7 5268 Malvidae
Araha.56154s0001.1.p A. halleri v1.1 124252720 Plant self-incompatibility protein S1 family 7 5268 Malvidae
Brara.B01976.1.p B. rapa FPsc v1.3 124252720 Plant self-incompatibility protein S1 family 16 5268 Malvidae
Brara.C00503.1.p B. rapa FPsc v1.3 124252720 Plant self-incompatibility protein S1 family 16 5268 Malvidae
Brara.C04488.1.p B. rapa FPsc v1.3 124252720 Plant self-incompatibility protein S1 family 16 5268 Malvidae
Brara.A03030.1.p B. rapa FPsc v1.3 124252720 Plant self-incompatibility protein S1 family 16 5268 Malvidae
Brara.I03323.1.p B. rapa FPsc v1.3 124252720 Plant self-incompatibility protein S1 family 16 5268 Malvidae