Gene : AT1G04645 A. thaliana TAIR10
Defline:  (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED Genomic Order:  383
Name:  ? AT1G04645 Secondary Identifier:  ? PAC:19649589
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G04645 0.5kb upstream 0.5kb upstream 994 true Chr1: 1293770-1294763 Arabidopsis thaliana
AT1G04645 0.5kb upstream 0.5kb upstream 500 false Chr1: 1294264-1294763 Arabidopsis thaliana
AT1G04645 0.5kb downstream 0.5kb downstream 994 true Chr1: 1293270-1294263 Arabidopsis thaliana
AT1G04645 0.5kb downstream 0.5kb downstream 500 false Chr1: 1293270-1293769 Arabidopsis thaliana
AT1G04645 1.0kb upstream 1.0kb upstream 1494 true Chr1: 1293770-1295263 Arabidopsis thaliana
AT1G04645 1.0kb upstream 1.0kb upstream 1000 false Chr1: 1294264-1295263 Arabidopsis thaliana
AT1G04645 1.0kb downstream 1.0kb downstream 1494 true Chr1: 1292770-1294263 Arabidopsis thaliana
AT1G04645 1.0kb downstream 1.0kb downstream 1000 false Chr1: 1292770-1293769 Arabidopsis thaliana
AT1G04645 2.0kb upstream 2.0kb upstream 2494 true Chr1: 1293770-1296263 Arabidopsis thaliana
AT1G04645 2.0kb upstream 2.0kb upstream 2000 false Chr1: 1294264-1296263 Arabidopsis thaliana
AT1G04645 2.0kb downstream 2.0kb downstream 2494 true Chr1: 1291770-1294263 Arabidopsis thaliana
AT1G04645 2.0kb downstream 2.0kb downstream 2000 false Chr1: 1291770-1293769 Arabidopsis thaliana
AT1G04645 5.0kb upstream 5.0kb upstream 5494 true Chr1: 1293770-1299263 Arabidopsis thaliana
AT1G04645 5.0kb upstream 5.0kb upstream 5000 false Chr1: 1294264-1299263 Arabidopsis thaliana
AT1G04645 5.0kb downstream 5.0kb downstream 5494 true Chr1: 1288770-1294263 Arabidopsis thaliana
AT1G04645 5.0kb downstream 5.0kb downstream 5000 false Chr1: 1288770-1293769 Arabidopsis thaliana
AT1G04645 10.0kb upstream 10.0kb upstream 10494 true Chr1: 1293770-1304263 Arabidopsis thaliana
AT1G04645 10.0kb upstream 10.0kb upstream 10000 false Chr1: 1294264-1304263 Arabidopsis thaliana
AT1G04645 10.0kb downstream 10.0kb downstream 10494 true Chr1: 1283770-1294263 Arabidopsis thaliana
AT1G04645 10.0kb downstream 10.0kb downstream 10000 false Chr1: 1283770-1293769 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380670 5261 Brassicaceae View MSA
123841059 5264 Brassicales-Malvales View MSA
124350397 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.436       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain