Protein Family : Plant self-incompatibility protein S1 family 124350397

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  51

51 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g043463m.g (1 of 15) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. sinensis v1.1 450   scaffold01286: 17427-17876
orange1.1g038531m.g (1 of 32) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) C. sinensis v1.1 327   scaffold00324: 77525-77851
AT4G24975 (1 of 3) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN A. thaliana TAIR10 408   Chr4: 12843802-12844209
AT4G24973 (1 of 3) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN A. thaliana TAIR10 405   Chr4: 12840970-12841374
AT5G12060 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 453   Chr5: 3894919-3895371
AT3G17080 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 579   Chr3: 5825289-5825867
AT1G04645 (1 of 20) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. thaliana TAIR10 494   Chr1: 1293770-1294263
Thhalv10027201m.g (1 of 1) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN E. salsugineum v1.0 402   scaffold_1: 6412017-6412418
Thhalv10022076m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 414   scaffold_13: 3512568-3512981
Thhalv10015241m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 577   scaffold_2: 3975306-3975882
Thhalv10009662m.g (1 of 14) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED E. salsugineum v1.0 333   scaffold_5: 14327295-14327627
Ciclev10023727m.g (1 of 41) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) C. clementina v1.0 366   scaffold_3: 24753302-24753667
Ciclev10006406m.g (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. clementina v1.0 450   scaffold_9: 9092994-9093443
Ciclev10006673m.g (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. clementina v1.0 450   scaffold_9: 9136989-9137438
Gorai.005G259300 (1 of 27) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) G. raimondii v2.1 555   Chr05: 63495515-63496069
Gorai.006G055500 (1 of 6) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED G. raimondii v2.1 408   Chr06: 20294824-20295231
Thecc1EG006445 (1 of 12) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) T. cacao v1.1 661   scaffold_2: 2250611-2251271
Araha.16377s0003 (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. halleri v1.1 1588   Scaffold16377: 13871-15458
Araha.18703s0002 (1 of 21) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED A. halleri v1.1 387   Scaffold18703: 7902-8288
Araha.29780s0002 (1 of 2) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN A. halleri v1.1 396   Scaffold29780: 17479-17874
Cagra.1216s0017 (1 of 4) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN C. grandiflora v1.1 414   Scaffold1216: 66443-66856
Cagra.1216s0018 (1 of 4) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN C. grandiflora v1.1 408   Scaffold1216: 68291-68698
Cagra.1671s0085 (1 of 22) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. grandiflora v1.1 405   Scaffold1671: 324747-325151
Cagra.2197s0009 (1 of 4) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN C. grandiflora v1.1 405   Scaffold2197: 30445-30849
Cagra.4396s0014 (1 of 22) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED C. grandiflora v1.1 456   Scaffold4396: 43830-44285
Brara.A03022 (1 of 43) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. rapa FPsc v1.3 369   A01: 25705349-25705717
Brara.A03023 (1 of 43) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. rapa FPsc v1.3 372   A01: 25712879-25713250
Brara.B00833 (1 of 43) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. rapa FPsc v1.3 471   A02: 3956458-3956928
Brara.B01976 (1 of 43) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. rapa FPsc v1.3 345   A02: 12204910-12205254
Brara.C00503 (1 of 43) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED B. rapa FPsc v1.3 417   A03: 2355426-2355842

51 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g043463m C. sinensis v1.1 124350397 Plant self-incompatibility protein S1 family 2 5266 SBM
orange1.1g038531m C. sinensis v1.1 124350397 Plant self-incompatibility protein S1 family 2 5266 SBM
AT4G24973.1 A. thaliana TAIR10 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
AT3G17080.1 A. thaliana TAIR10 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
AT5G12060.1 A. thaliana TAIR10 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
Thhalv10015241m E. salsugineum v1.0 124350397 Plant self-incompatibility protein S1 family 4 5266 SBM
Gorai.005G259300.1 G. raimondii v2.1 124350397 Plant self-incompatibility protein S1 family 2 5266 SBM
Gorai.006G055500.1 G. raimondii v2.1 124350397 Plant self-incompatibility protein S1 family 2 5266 SBM
Thecc1EG006445t1 T. cacao v1.1 124350397 Plant self-incompatibility protein S1 family 1 5266 SBM
Araha.16377s0003.1.p A. halleri v1.1 124350397 Plant self-incompatibility protein S1 family 3 5266 SBM
Araha.29780s0002.1.p A. halleri v1.1 124350397 Plant self-incompatibility protein S1 family 3 5266 SBM
Brara.B01976.1.p B. rapa FPsc v1.3 124350397 Plant self-incompatibility protein S1 family 12 5266 SBM
Brara.C00503.1.p B. rapa FPsc v1.3 124350397 Plant self-incompatibility protein S1 family 12 5266 SBM
Brara.I05481.1.p B. rapa FPsc v1.3 124350397 Plant self-incompatibility protein S1 family 12 5266 SBM
Brara.H03040.1.p B. rapa FPsc v1.3 124350397 Plant self-incompatibility protein S1 family 12 5266 SBM
Brara.H03039.1.p B. rapa FPsc v1.3 124350397 Plant self-incompatibility protein S1 family 12 5266 SBM
AT1G04645.1 A. thaliana TAIR10 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
AT4G24975.1 A. thaliana TAIR10 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
Thhalv10027201m E. salsugineum v1.0 124350397 Plant self-incompatibility protein S1 family 4 5266 SBM
Thhalv10022076m E. salsugineum v1.0 124350397 Plant self-incompatibility protein S1 family 4 5266 SBM
Thhalv10009662m E. salsugineum v1.0 124350397 Plant self-incompatibility protein S1 family 4 5266 SBM
Ciclev10006406m C. clementina v1.0 124350397 Plant self-incompatibility protein S1 family 3 5266 SBM
Ciclev10006673m C. clementina v1.0 124350397 Plant self-incompatibility protein S1 family 3 5266 SBM
Ciclev10023727m C. clementina v1.0 124350397 Plant self-incompatibility protein S1 family 3 5266 SBM
Araha.18703s0002.1.p A. halleri v1.1 124350397 Plant self-incompatibility protein S1 family 3 5266 SBM
Cagra.2197s0009.1.p C. grandiflora v1.1 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
Cagra.1216s0017.1.p C. grandiflora v1.1 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
Cagra.1216s0018.1.p C. grandiflora v1.1 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
Cagra.1671s0085.1.p C. grandiflora v1.1 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM
Cagra.4396s0014.1.p C. grandiflora v1.1 124350397 Plant self-incompatibility protein S1 family 5 5266 SBM