Gene : Cagra.1216s0018 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31232:SF6 - SELF-INCOMPATIBILITY S1 FAMILY PROTEIN Genomic Order:  18
Name:  ? Cagra.1216s0018 Secondary Identifier:  ? PAC:28916760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1216s0018 0.5kb upstream 0.5kb upstream 908 true Scaffold1216: 67791-68698 Capsella grandiflora
Cagra.1216s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold1216: 67791-68290 Capsella grandiflora
Cagra.1216s0018 0.5kb downstream 0.5kb downstream 908 true Scaffold1216: 68291-69198 Capsella grandiflora
Cagra.1216s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold1216: 68699-69198 Capsella grandiflora
Cagra.1216s0018 1.0kb upstream 1.0kb upstream 1408 true Scaffold1216: 67291-68698 Capsella grandiflora
Cagra.1216s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold1216: 67291-68290 Capsella grandiflora
Cagra.1216s0018 1.0kb downstream 1.0kb downstream 1408 true Scaffold1216: 68291-69698 Capsella grandiflora
Cagra.1216s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold1216: 68699-69698 Capsella grandiflora
Cagra.1216s0018 2.0kb upstream 2.0kb upstream 2408 true Scaffold1216: 66291-68698 Capsella grandiflora
Cagra.1216s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold1216: 66291-68290 Capsella grandiflora
Cagra.1216s0018 2.0kb downstream 2.0kb downstream 2408 true Scaffold1216: 68291-70698 Capsella grandiflora
Cagra.1216s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold1216: 68699-70698 Capsella grandiflora
Cagra.1216s0018 5.0kb upstream 5.0kb upstream 5408 true Scaffold1216: 63291-68698 Capsella grandiflora
Cagra.1216s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold1216: 63291-68290 Capsella grandiflora
Cagra.1216s0018 5.0kb downstream 5.0kb downstream 5408 true Scaffold1216: 68291-73698 Capsella grandiflora
Cagra.1216s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold1216: 68699-73698 Capsella grandiflora
Cagra.1216s0018 10.0kb upstream 10.0kb upstream 10408 true Scaffold1216: 58291-68698 Capsella grandiflora
Cagra.1216s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold1216: 58291-68290 Capsella grandiflora
Cagra.1216s0018 10.0kb downstream 10.0kb downstream 10408 true Scaffold1216: 68291-78698 Capsella grandiflora
Cagra.1216s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold1216: 68699-78698 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376953 5261 Brassicaceae View MSA
123841059 5264 Brassicales-Malvales View MSA
124350397 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain