Gene : Cagra.1671s0085 C. grandiflora v1.1
Defline:  (1 of 22) PTHR31232:SF5 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED Genomic Order:  85
Name:  ? Cagra.1671s0085 Secondary Identifier:  ? PAC:28914279
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0085 0.5kb upstream 0.5kb upstream 905 true Scaffold1671: 324747-325651 Capsella grandiflora
Cagra.1671s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 325152-325651 Capsella grandiflora
Cagra.1671s0085 0.5kb downstream 0.5kb downstream 905 true Scaffold1671: 324247-325151 Capsella grandiflora
Cagra.1671s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 324247-324746 Capsella grandiflora
Cagra.1671s0085 1.0kb upstream 1.0kb upstream 1405 true Scaffold1671: 324747-326151 Capsella grandiflora
Cagra.1671s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 325152-326151 Capsella grandiflora
Cagra.1671s0085 1.0kb downstream 1.0kb downstream 1405 true Scaffold1671: 323747-325151 Capsella grandiflora
Cagra.1671s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 323747-324746 Capsella grandiflora
Cagra.1671s0085 2.0kb upstream 2.0kb upstream 2405 true Scaffold1671: 324747-327151 Capsella grandiflora
Cagra.1671s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 325152-327151 Capsella grandiflora
Cagra.1671s0085 2.0kb downstream 2.0kb downstream 2405 true Scaffold1671: 322747-325151 Capsella grandiflora
Cagra.1671s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 322747-324746 Capsella grandiflora
Cagra.1671s0085 5.0kb upstream 5.0kb upstream 5405 true Scaffold1671: 324747-330151 Capsella grandiflora
Cagra.1671s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 325152-330151 Capsella grandiflora
Cagra.1671s0085 5.0kb downstream 5.0kb downstream 5405 true Scaffold1671: 319747-325151 Capsella grandiflora
Cagra.1671s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 319747-324746 Capsella grandiflora
Cagra.1671s0085 10.0kb upstream 10.0kb upstream 10405 true Scaffold1671: 324747-335151 Capsella grandiflora
Cagra.1671s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 325152-335151 Capsella grandiflora
Cagra.1671s0085 10.0kb downstream 10.0kb downstream 10405 true Scaffold1671: 314747-325151 Capsella grandiflora
Cagra.1671s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 314747-324746 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380670 5261 Brassicaceae View MSA
123841059 5264 Brassicales-Malvales View MSA
124350397 5266 SBM View MSA
124252720 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain