Protein Family : RING/U-box superfamily protein 124249522

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  25

25 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28597.t000006 (1 of 1) PTHR14155:SF138 - GH10160P R. communis v0.1 1073   28597: 29848-30920
orange1.1g030757m.g (1 of 2) PTHR14155:SF138 - GH10160P C. sinensis v1.1 1237   scaffold00048: 501003-502239
AT2G18670 (1 of 3) PTHR14155:SF138 - GH10160P A. thaliana TAIR10 2510   Chr2: 8093220-8095729
Thhalv10022879m.g (1 of 3) PTHR14155:SF138 - GH10160P E. salsugineum v1.0 766   scaffold_11: 528257-529022
Ciclev10009692m.g (1 of 2) PTHR14155:SF138 - GH10160P C. clementina v1.0 1655   scaffold_1: 27745718-27747372
Lus10019979.g (1 of 3) PTHR14155:SF138 - GH10160P L. usitatissimum v1.0 495   scaffold23: 209982-210476
Lus10015506.g (1 of 3) PTHR14155:SF138 - GH10160P L. usitatissimum v1.0 402   scaffold860: 294467-294868
Gorai.004G272900 (1 of 3) PTHR14155:SF138 - GH10160P G. raimondii v2.1 537   Chr04: 60736564-60737100
Thecc1EG038587 (1 of 1) PTHR14155:SF138 - GH10160P T. cacao v1.1 1051   scaffold_9: 10514529-10515579
Cagra.0389s0001 (1 of 4) PTHR14155:SF138 - GH10160P C. grandiflora v1.1 537   Scaffold389: 767-1303
Brara.G00123 (1 of 7) PTHR14155:SF138 - GH10160P B. rapa FPsc v1.3 912   A07: 1037421-1038332
Bostr.18351s0333 (1 of 2) PTHR14155:SF138 - GH10160P B. stricta v1.2 546   Scaffold18351: 2743516-2744061
SapurV1A.0183s0220 (1 of 6) PTHR14155:SF138 - GH10160P S. purpurea v1.0 495   chr18: 10301020-10301514
SapurV1A.0183s0230 (1 of 6) PTHR14155:SF138 - GH10160P S. purpurea v1.0 501   chr18: 10293850-10294350
SapurV1A.0497s0060 (1 of 6) K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) S. purpurea v1.0 3693   chr06: 15933257-15936949
Manes.06G025800 (1 of 2) PTHR14155:SF138 - GH10160P M. esculenta v6.1 930   Chromosome06: 5397014-5397943
AL3G52060 (1 of 6) PTHR14155:SF138 - GH10160P A. lyrata v2.1 587   scaffold_3: 22966775-22967361
Potri.006G175700 (1 of 6) K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) P. trichocarpa v3.1 721   Chr06: 18827434-18828154
Potri.006G176200 (1 of 6) K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) P. trichocarpa v3.1 2745   Chr06: 18878348-18881092
Potri.018G098000 (1 of 6) PTHR14155:SF138 - GH10160P P. trichocarpa v3.1 771   Chr18: 12643275-12644045
Potri.018G098100 (1 of 6) PTHR14155:SF138 - GH10160P P. trichocarpa v3.1 2213   Chr18: 12646449-12648661
Podel.06G184200 (1 of 5) K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) P. deltoides WV94 v2.1 4883   Chr06: 18587685-18592567
Podel.18G101200 (1 of 6) PTHR14155:SF138 - GH10160P P. deltoides WV94 v2.1 3159   Chr18: 12744351-12747509
Podel.18G101100 (1 of 6) PTHR14155:SF138 - GH10160P P. deltoides WV94 v2.1 899   Chr18: 12742414-12743312
Carub.0003s3293 (1 of 4) PTHR14155:SF138 - GH10160P C. rubella v1.1 1774   scaffold_3: 13940070-13941843

25 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT2G18670.1 A. thaliana TAIR10 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Lus10015506 L. usitatissimum v1.0 124249522 RING/U-box superfamily protein 2 5268 Malvidae
Bostr.18351s0333.1.p B. stricta v1.2 124249522 RING/U-box superfamily protein 1 5268 Malvidae
SapurV1A.0183s0220.1.p S. purpurea v1.0 124249522 RING/U-box superfamily protein 3 5268 Malvidae
AL3G52060.t1 A. lyrata v2.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Potri.006G175700.1.p P. trichocarpa v3.1 124249522 RING/U-box superfamily protein 4 5268 Malvidae
Potri.018G098100.1.p P. trichocarpa v3.1 124249522 RING/U-box superfamily protein 4 5268 Malvidae
Podel.18G101200.1.p P. deltoides WV94 v2.1 124249522 RING/U-box superfamily protein 3 5268 Malvidae
28597.m000120 R. communis v0.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
orange1.1g030757m C. sinensis v1.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Thhalv10022879m E. salsugineum v1.0 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Ciclev10009692m C. clementina v1.0 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Lus10019979 L. usitatissimum v1.0 124249522 RING/U-box superfamily protein 2 5268 Malvidae
Gorai.004G272900.1 G. raimondii v2.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Thecc1EG038587t1 T. cacao v1.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Cagra.0389s0001.1.p C. grandiflora v1.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Brara.G00123.1.p B. rapa FPsc v1.3 124249522 RING/U-box superfamily protein 1 5268 Malvidae
SapurV1A.0183s0230.1.p S. purpurea v1.0 124249522 RING/U-box superfamily protein 3 5268 Malvidae
SapurV1A.0497s0060.1.p S. purpurea v1.0 124249522 RING/U-box superfamily protein 3 5268 Malvidae
Manes.06G025800.1.p M. esculenta v6.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae
Potri.006G176200.1.p P. trichocarpa v3.1 124249522 RING/U-box superfamily protein 4 5268 Malvidae
Potri.018G098000.1.p P. trichocarpa v3.1 124249522 RING/U-box superfamily protein 4 5268 Malvidae
Podel.06G184200.1.p P. deltoides WV94 v2.1 124249522 RING/U-box superfamily protein 3 5268 Malvidae
Podel.18G101100.1.p P. deltoides WV94 v2.1 124249522 RING/U-box superfamily protein 3 5268 Malvidae
Carub.0003s3293.1.p C. rubella v1.1 124249522 RING/U-box superfamily protein 1 5268 Malvidae