Gene : Carub.0003s3293 C. rubella v1.1
Defline:  (1 of 4) PTHR14155:SF138 - GH10160P Genomic Order:  3293
Name:  ? Carub.0003s3293 Secondary Identifier:  ? PAC:39240092
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3293 0.5kb upstream 0.5kb upstream 2274 true scaffold_3: 13939570-13941843 Capsella rubella
Carub.0003s3293 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13939570-13940069 Capsella rubella
Carub.0003s3293 0.5kb downstream 0.5kb downstream 2274 true scaffold_3: 13940070-13942343 Capsella rubella
Carub.0003s3293 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13941844-13942343 Capsella rubella
Carub.0003s3293 1.0kb upstream 1.0kb upstream 2774 true scaffold_3: 13939070-13941843 Capsella rubella
Carub.0003s3293 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13939070-13940069 Capsella rubella
Carub.0003s3293 1.0kb downstream 1.0kb downstream 2774 true scaffold_3: 13940070-13942843 Capsella rubella
Carub.0003s3293 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13941844-13942843 Capsella rubella
Carub.0003s3293 2.0kb upstream 2.0kb upstream 3774 true scaffold_3: 13938070-13941843 Capsella rubella
Carub.0003s3293 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13938070-13940069 Capsella rubella
Carub.0003s3293 2.0kb downstream 2.0kb downstream 3774 true scaffold_3: 13940070-13943843 Capsella rubella
Carub.0003s3293 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13941844-13943843 Capsella rubella
Carub.0003s3293 5.0kb upstream 5.0kb upstream 6774 true scaffold_3: 13935070-13941843 Capsella rubella
Carub.0003s3293 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13935070-13940069 Capsella rubella
Carub.0003s3293 5.0kb downstream 5.0kb downstream 6774 true scaffold_3: 13940070-13946843 Capsella rubella
Carub.0003s3293 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13941844-13946843 Capsella rubella
Carub.0003s3293 10.0kb upstream 10.0kb upstream 11774 true scaffold_3: 13930070-13941843 Capsella rubella
Carub.0003s3293 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13930070-13940069 Capsella rubella
Carub.0003s3293 10.0kb downstream 10.0kb downstream 11774 true scaffold_3: 13940070-13951843 Capsella rubella
Carub.0003s3293 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13941844-13951843 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370949 5261 Brassicaceae View MSA
123833220 5264 Brassicales-Malvales View MSA
124346055 5266 SBM View MSA
124249522 5268 Malvidae View MSA
124063857 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain