Protein Family : CCCH-type zinc finger protein with ARM repeat domain 124246051

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  35

35 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
27810.t000004 (1 of 3) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) R. communis v0.1 3982   27810: 27779-31760
27810.t000005 (1 of 3) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) R. communis v0.1 4379   27810: 56470-60848
orange1.1g006944m.g (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 C. sinensis v1.1 4189   scaffold00387: 139317-143505
orange1.1g004911m.g (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 C. sinensis v1.1 3196   scaffold00003: 4208850-4212045
AT2G41900 (1 of 2) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) A. thaliana TAIR10 3518   Chr2: 17490405-17493922
Thhalv10016315m.g (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 E. salsugineum v1.0 3565   scaffold_10: 11429312-11432876
Ciclev10030816m.g (1 of 3) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 C. clementina v1.0 3329   scaffold_4: 25541396-25544724
Ciclev10004423m.g (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 C. clementina v1.0 4223   scaffold_9: 25305959-25310181
Lus10019709.g (1 of 1) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 L. usitatissimum v1.0 3588   scaffold420: 446826-450413
Gorai.002G152300 (1 of 3) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 G. raimondii v2.1 3554   Chr02: 30629237-30632790
Gorai.003G093600 (1 of 3) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 G. raimondii v2.1 3768   Chr03: 29288940-29292707
Gorai.004G037500 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 G. raimondii v2.1 3949   Chr04: 3094396-3098344
Thecc1EG005881 (1 of 2) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 T. cacao v1.1 4824   scaffold_1: 38654096-38658919
Thecc1EG024747 (1 of 5) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) T. cacao v1.1 4375   scaffold_5: 28288391-28292765
Araha.36543s0001 (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 A. halleri v1.1 3290   Scaffold36543: 3884-7173
Cagra.13389s0004 (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 C. grandiflora v1.1 3441   Scaffold13389: 19954-23394
Brara.D02550 (1 of 2) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 B. rapa FPsc v1.3 3284   A04: 19916989-19920272
Bostr.25993s0590 (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 B. stricta v1.2 3499   Scaffold25993: 2849184-2852682
SapurV1A.4681s0010 (1 of 3) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 S. purpurea v1.0 2698   Scaffold4681: 5084-7781
SapurV1A.0133s0380 (1 of 3) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 S. purpurea v1.0 4113   chr06: 3675551-3679663
SapurV1A.0027s0390 (1 of 2) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 S. purpurea v1.0 3833   chr09: 4990295-4994127
SapurV1A.0037s0280 (1 of 8) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) S. purpurea v1.0 4641   chr09: 9703736-9708376
SapurV1A.0111s0230 (1 of 2) PTHR14493//PTHR14493:SF47 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 S. purpurea v1.0 3945   chr16: 15004179-15008123
Manes.08G048800 (1 of 5) PTHR14493:SF22 - ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN M. esculenta v6.1 5330   Chromosome08: 4654019-4659348
Manes.07G006200 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 M. esculenta v6.1 4388   Chromosome07: 779392-783779
Manes.10G142900 (1 of 5) PTHR14493:SF22 - ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN M. esculenta v6.1 4141   Chromosome10: 25486951-25491091
AL4G40240 (1 of 1) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 A. lyrata v2.1 3499   scaffold_4: 20508752-20512250
Potri.001G266700 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 P. trichocarpa v3.1 3596   Chr01: 27464754-27468349
Potri.006G053800 (1 of 2) PTHR14493:SF43 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30 P. trichocarpa v3.1 4101   Chr06: 3923944-3928044
Potri.009G061000 (1 of 2) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 P. trichocarpa v3.1 4517   Chr09: 6303472-6307988

35 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT2G41900.1 A. thaliana TAIR10 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Gorai.003G093600.1 G. raimondii v2.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
Thecc1EG005881t2 T. cacao v1.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
SapurV1A.0111s0230.1.p S. purpurea v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 5 5268 Malvidae
Manes.10G142900.1.p M. esculenta v6.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
AL4G40240.t1 A. lyrata v2.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Potri.009G061000.5.p P. trichocarpa v3.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 4 5268 Malvidae
Podel.01G282600.1.p P. deltoides WV94 v2.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
27810.m000634 R. communis v0.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
27810.m000633 R. communis v0.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
orange1.1g006944m C. sinensis v1.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
orange1.1g004911m C. sinensis v1.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
Thhalv10016315m E. salsugineum v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Ciclev10004423m C. clementina v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
Ciclev10030816m C. clementina v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
Lus10019709 L. usitatissimum v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Gorai.004G037500.1 G. raimondii v2.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
Gorai.002G152300.1 G. raimondii v2.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
Thecc1EG024747t1 T. cacao v1.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 2 5268 Malvidae
Araha.36543s0001.1.p A. halleri v1.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Cagra.13389s0004.1.p C. grandiflora v1.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Brara.D02550.1.p B. rapa FPsc v1.3 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
Bostr.25993s0590.1.p B. stricta v1.2 124246051 CCCH-type zinc finger protein with ARM repeat domain 1 5268 Malvidae
SapurV1A.0027s0390.1.p S. purpurea v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 5 5268 Malvidae
SapurV1A.4681s0010.1.p S. purpurea v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 5 5268 Malvidae
SapurV1A.0037s0280.1.p S. purpurea v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 5 5268 Malvidae
SapurV1A.0133s0380.1.p S. purpurea v1.0 124246051 CCCH-type zinc finger protein with ARM repeat domain 5 5268 Malvidae
Manes.08G048800.1.p M. esculenta v6.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
Manes.07G006200.1.p M. esculenta v6.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 3 5268 Malvidae
Potri.006G053800.1.p P. trichocarpa v3.1 124246051 CCCH-type zinc finger protein with ARM repeat domain 4 5268 Malvidae