Protein Family : light harvesting complex photosystem II 124245849

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  26

26 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29701.t000022 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED R. communis v0.1 1664   29701: 179105-180768
AT5G01530 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. thaliana TAIR10 LHCB4.1 1509   Chr5: 208937-210445
AT3G08940 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. thaliana TAIR10 LHCB4.2 1209   Chr3: 2717675-2718883
Thhalv10021263m.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1592   scaffold_13: 6671097-6672688
Thhalv10014055m.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1617   scaffold_2: 193819-195435
Ciclev10012370m.g (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. clementina v1.0 1830   scaffold_6: 16218093-16219922
Lus10035512.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED L. usitatissimum v1.0 1285   scaffold464: 50509-51793
Gorai.002G263900 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED G. raimondii v2.1 1606   Chr02: 62433770-62435375
Thecc1EG021708 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED T. cacao v1.1 1479   scaffold_5: 885060-886538
Cagra.4082s0032 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1354   Scaffold4082: 124518-125871
Cagra.22463s0002 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1120   Scaffold22463: 742-1861
Brara.B00018 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. rapa FPsc v1.3 1223   A02: 136690-137912
Brara.E03123 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. rapa FPsc v1.3 1120   A05: 25698159-25699278
Bostr.6251s0120 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. stricta v1.2 1429   Scaffold6251: 583063-584491
Bostr.22252s0178 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. stricta v1.2 1156   Scaffold22252: 829715-830870
SapurV1A.0001s0670 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) S. purpurea v1.0 1657   chr06: 7101309-7102965
SapurV1A.0431s0110 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) S. purpurea v1.0 1559   chr16: 8990212-8991770
Manes.08G091700 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. esculenta v6.1 1192   Chromosome08: 23807139-23808330
AL3G19940 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. lyrata v2.1 1183   scaffold_3: 3526706-3527888
AL6G10520 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. lyrata v2.1 1413   scaffold_6: 208904-210316
Potri.006G099500 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) P. trichocarpa v3.1 1156   Chr06: 7645772-7646927
Potri.016G115200 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) P. trichocarpa v3.1 1336   Chr16: 11962883-11964218
Podel.06G108400 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) P. deltoides WV94 v2.1 1077   Chr06: 8690442-8691518
Podel.16G120900 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) P. deltoides WV94 v2.1 1201   Chr16: 12211150-12212350
Carub.0006s0030 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) C. rubella v1.1 1309   scaffold_6: 103153-104461
Carub.0003s0807 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) C. rubella v1.1 1159   scaffold_3: 2775630-2776788

26 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29701.m000601 R. communis v0.1 124245849 light harvesting complex photosystem II 1 5268 Malvidae
Thhalv10021263m E. salsugineum v1.0 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Thhalv10014055m E. salsugineum v1.0 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Lus10035512 L. usitatissimum v1.0 124245849 light harvesting complex photosystem II 1 5268 Malvidae
Cagra.4082s0032.1.p C. grandiflora v1.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Cagra.22463s0002.1.p C. grandiflora v1.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Brara.B00018.1.p B. rapa FPsc v1.3 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Brara.E03123.1.p B. rapa FPsc v1.3 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Bostr.6251s0120.1.p B. stricta v1.2 124245849 light harvesting complex photosystem II 2 5268 Malvidae
SapurV1A.0001s0670.1.p S. purpurea v1.0 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Manes.08G091700.1.p M. esculenta v6.1 124245849 light harvesting complex photosystem II 1 5268 Malvidae
AL6G10520.t1 A. lyrata v2.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Podel.16G120900.1.p P. deltoides WV94 v2.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
AT5G01530.1 A. thaliana TAIR10 124245849 light harvesting complex photosystem II 2 5268 Malvidae
AT3G08940.2 A. thaliana TAIR10 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Ciclev10012370m C. clementina v1.0 124245849 light harvesting complex photosystem II 1 5268 Malvidae
Gorai.002G263900.1 G. raimondii v2.1 124245849 light harvesting complex photosystem II 1 5268 Malvidae
Thecc1EG021708t1 T. cacao v1.1 124245849 light harvesting complex photosystem II 1 5268 Malvidae
Bostr.22252s0178.1.p B. stricta v1.2 124245849 light harvesting complex photosystem II 2 5268 Malvidae
SapurV1A.0431s0110.1.p S. purpurea v1.0 124245849 light harvesting complex photosystem II 2 5268 Malvidae
AL3G19940.t1 A. lyrata v2.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Potri.016G115200.1.p P. trichocarpa v3.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Potri.006G099500.1.p P. trichocarpa v3.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Podel.06G108400.1.p P. deltoides WV94 v2.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Carub.0003s0807.1.p C. rubella v1.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae
Carub.0006s0030.1.p C. rubella v1.1 124245849 light harvesting complex photosystem II 2 5268 Malvidae