Protein Family : Vacuolar protein sorting-associated protein VPS28 family protein 124244249

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  29

29 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29917.t000036 (1 of 1) K12184 - ESCRT-I complex subunit VPS28 (VPS28) R. communis v0.1 2042   29917: 216872-218913
orange1.1g028441m.g (1 of 1) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 C. sinensis v1.1 2031   scaffold00010: 1680075-1682105
AT4G05000 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) A. thaliana TAIR10 VPS28-2 1697   Chr4: 2563044-2564740
AT4G21560 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) A. thaliana TAIR10 VPS28-1 1773   Chr4: 11468761-11470533
Thhalv10026248m.g (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 E. salsugineum v1.0 1863   scaffold_1: 8000151-8002013
Thhalv10028962m.g (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 E. salsugineum v1.0 1022   scaffold_3: 2100124-2101145
Ciclev10016702m.g (1 of 1) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 C. clementina v1.0 2280   scaffold_2: 32919902-32922181
Lus10011243.g (1 of 3) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 L. usitatissimum v1.0 630   scaffold1376: 350041-350670
Lus10018442.g (1 of 3) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 L. usitatissimum v1.0 630   scaffold251: 458326-458955
Gorai.006G085600 (1 of 4) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 G. raimondii v2.1 2201   Chr06: 32020741-32022941
Araha.2765s0001 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 A. halleri v1.1 1442   Scaffold2765: 8828-10269
Araha.36669s0002 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 A. halleri v1.1 1675   Scaffold36669: 2400-4074
Cagra.3519s0008 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 C. grandiflora v1.1 1936   Scaffold3519: 27981-29916
Cagra.5070s0020 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 C. grandiflora v1.1 1459   Scaffold5070: 86218-87676
Brara.A01186 (1 of 3) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 B. rapa FPsc v1.3 1782   A01: 6308003-6309784
Brara.I02182 (1 of 3) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 B. rapa FPsc v1.3 1153   A09: 16513514-16514666
Bostr.2983s0043 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 B. stricta v1.2 1778   Scaffold2983: 212428-214205
Bostr.10689s0101 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 B. stricta v1.2 630   Scaffold10689: 557261-557890
SapurV1A.0044s0170 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) S. purpurea v1.0 2056   chr11: 2986544-2988599
SapurV1A.0028s0040 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) S. purpurea v1.0 1814   chr04: 1791483-1793296
Manes.17G039800 (1 of 2) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 M. esculenta v6.1 1852   Chromosome17: 17270972-17272823
AL6G48580 (1 of 3) K12184 - ESCRT-I complex subunit VPS28 (VPS28) A. lyrata v2.1 1645   scaffold_6: 22728725-22730369
AL7G32460 (1 of 3) K12184 - ESCRT-I complex subunit VPS28 (VPS28) A. lyrata v2.1 1878   scaffold_7: 9221546-9223423
Potri.004G035500 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) P. trichocarpa v3.1 2056   Chr04: 2643524-2645579
Potri.011G043800 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) P. trichocarpa v3.1 1988   Chr11: 3721759-3723746
Podel.04G036700 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) P. deltoides WV94 v2.1 1989   Chr04: 2931545-2933533
Podel.11G038400 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) P. deltoides WV94 v2.1 1972   Chr11: 3390306-3392277
Carub.0007s1985 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) C. rubella v1.1 2817   scaffold_7: 7429727-7432543
Carub.0006s3297 (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) C. rubella v1.1 1732   scaffold_6: 14934071-14935802

29 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT4G05000.1 A. thaliana TAIR10 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
AT4G21560.1 A. thaliana TAIR10 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Ciclev10016702m C. clementina v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 1 5268 Malvidae
Brara.A01186.1.p B. rapa FPsc v1.3 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Bostr.2983s0043.1.p B. stricta v1.2 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Bostr.10689s0101.1.p B. stricta v1.2 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Podel.04G036700.1.p P. deltoides WV94 v2.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Podel.11G038400.1.p P. deltoides WV94 v2.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Carub.0006s3297.1.p C. rubella v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
29917.m001967 R. communis v0.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 1 5268 Malvidae
orange1.1g028441m C. sinensis v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 1 5268 Malvidae
Thhalv10028962m E. salsugineum v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Thhalv10026248m E. salsugineum v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Lus10011243 L. usitatissimum v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Lus10018442 L. usitatissimum v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Gorai.006G085600.1 G. raimondii v2.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 1 5268 Malvidae
Araha.2765s0001.1.p A. halleri v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Araha.36669s0002.1.p A. halleri v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Cagra.5070s0020.1.p C. grandiflora v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Cagra.3519s0008.1.p C. grandiflora v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Brara.I02182.1.p B. rapa FPsc v1.3 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
SapurV1A.0044s0170.1.p S. purpurea v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
SapurV1A.0028s0040.1.p S. purpurea v1.0 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Manes.17G039800.1.p M. esculenta v6.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 1 5268 Malvidae
AL6G48580.t1 A. lyrata v2.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
AL7G32460.t1 A. lyrata v2.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Potri.004G035500.1.p P. trichocarpa v3.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Potri.011G043800.1.p P. trichocarpa v3.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae
Carub.0007s1985.1.p C. rubella v1.1 124244249 Vacuolar protein sorting-associated protein VPS28 family protein 2 5268 Malvidae