Protein Family : nonsense-mediated mRNA decay NMD3 family protein 124241082

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  23

23 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
28392.t000002 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) R. communis v0.1 2797   28392: 31814-34610
orange1.1g010400m.g (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 C. sinensis v1.1 2612   scaffold00042: 230597-233208
AT2G03820 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) A. thaliana TAIR10 2073   Chr2: 1164957-1167029
Thhalv10019828m.g (1 of 1) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 E. salsugineum v1.0 1551   scaffold_9: 7852644-7854194
Ciclev10011515m.g (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 C. clementina v1.0 2542   scaffold_6: 22744049-22746590
Lus10023975.g (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 L. usitatissimum v1.0 1554   scaffold177: 748306-749859
Lus10025109.g (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 L. usitatissimum v1.0 1554   scaffold305: 332685-334238
Gorai.001G256700 (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 G. raimondii v2.1 2303   Chr01: 53047984-53050286
Gorai.006G024500 (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 G. raimondii v2.1 2773   Chr06: 6301408-6304180
Thecc1EG018360 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) T. cacao v1.1 2934   scaffold_4: 13884903-13887836
Araha.31003s0003 (1 of 1) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 A. halleri v1.1 1996   Scaffold31003: 8574-10569
Cagra.2230s0003 (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 C. grandiflora v1.1 2965   Scaffold2230: 8680-11644
Brara.G02624 (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 B. rapa FPsc v1.3 2063   A07: 21573370-21575432
Brara.A03584 (1 of 2) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 B. rapa FPsc v1.3 1836   A01: 29041068-29042903
Bostr.0556s0197 (1 of 1) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 B. stricta v1.2 2136   Scaffold556: 1163790-1165925
SapurV1A.0397s0200 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) S. purpurea v1.0 3280   chr04: 9149018-9152297
Manes.01G121600 (1 of 1) PTHR12746 - NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 M. esculenta v6.1 2550   Chromosome01: 23942738-23945287
AL5G13610 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) A. lyrata v2.1 2085   scaffold_5: 2039023-2041107
Potri.004G085700 (1 of 2) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) P. trichocarpa v3.1 3230   Chr04: 7128853-7132082
Potri.004G121500 (1 of 2) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) P. trichocarpa v3.1 2580   Chr04: 11503605-11506184
Podel.01G039200 (1 of 1) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) P. deltoides WV94 v2.1 1535   Chr01: 2726024-2727558
Carub.0005s0298 (1 of 2) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) C. rubella v1.1 1548   scaffold_5: 1182266-1183813
Carub.0002s1197 (1 of 2) K07562 - nonsense-mediated mRNA decay protein 3 (NMD3) C. rubella v1.1 1863   scaffold_2: 7673701-7675563

23 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
28392.m000122 R. communis v0.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Gorai.006G024500.1 G. raimondii v2.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Thecc1EG018360t1 T. cacao v1.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Brara.A03584.1.p B. rapa FPsc v1.3 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
AL5G13610.t1 A. lyrata v2.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Podel.01G039200.1.p P. deltoides WV94 v2.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Carub.0005s0298.1.p C. rubella v1.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
orange1.1g010400m C. sinensis v1.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
AT2G03820.1 A. thaliana TAIR10 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Thhalv10019828m E. salsugineum v1.0 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Ciclev10011515m C. clementina v1.0 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Lus10023975 L. usitatissimum v1.0 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Lus10025109 L. usitatissimum v1.0 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Gorai.001G256700.1 G. raimondii v2.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Araha.31003s0003.1.p A. halleri v1.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Cagra.2230s0003.1.p C. grandiflora v1.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Brara.G02624.1.p B. rapa FPsc v1.3 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Bostr.0556s0197.1.p B. stricta v1.2 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
SapurV1A.0397s0200.1.p S. purpurea v1.0 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Manes.01G121600.1.p M. esculenta v6.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 1 5268 Malvidae
Potri.004G085700.1.p P. trichocarpa v3.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Potri.004G121500.1.p P. trichocarpa v3.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae
Carub.0002s1197.1.p C. rubella v1.1 124241082 nonsense-mediated mRNA decay NMD3 family protein 2 5268 Malvidae