Protein Family : sequence-specific DNA binding transcription factors 124238928

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  21

21 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29648.t000004 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) R. communis v0.1 2479   29648: 36375-38853
orange1.1g042018m.g (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. sinensis v1.1 2689   scaffold00002: 207064-209752
AT1G43860 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) A. thaliana TAIR10 2402   Chr1: 16622068-16624469
Thhalv10011594m.g (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS E. salsugineum v1.0 2299   scaffold_7: 13617454-13619752
Ciclev10001639m.g (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. clementina v1.0 2885   scaffold_5: 38186495-38189379
Lus10029749.g (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS L. usitatissimum v1.0 2051   scaffold418: 1016173-1018223
Lus10042780.g (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS L. usitatissimum v1.0 2383   scaffold67: 2014812-2017194
Gorai.005G083500 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS G. raimondii v2.1 2728   Chr05: 10291338-10294065
Thecc1EG035364 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) T. cacao v1.1 2894   scaffold_8: 8422485-8425378
Araha.54171s0002 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS A. halleri v1.1 2621   Scaffold54171: 8484-11104
Cagra.2493s0001 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS C. grandiflora v1.1 2427   Scaffold2493: 287-2713
Brara.E01759 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS B. rapa FPsc v1.3 1705   A05: 12926677-12928381
Bostr.12302s0053 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS B. stricta v1.2 2243   Scaffold12302: 908578-910820
SapurV1A.0261s0100 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) S. purpurea v1.0 2835   chr05: 14074251-14077085
Manes.02G173400 (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS M. esculenta v6.1 2785   Chromosome02: 13643938-13646722
AL1G51980 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) A. lyrata v2.1 2318   scaffold_1: 22333707-22336024
Potri.002G073200 (1 of 2) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) P. trichocarpa v3.1 2794   Chr02: 5071039-5073832
Potri.005G186700 (1 of 2) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) P. trichocarpa v3.1 2638   Chr05: 20407898-20410535
Podel.05G198300 (1 of 2) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) P. deltoides WV94 v2.1 2735   Chr05: 20600584-20603318
Podel.02G080200 (1 of 2) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) P. deltoides WV94 v2.1 2742   Chr02: 5722637-5725378
Carub.0001s3480 (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) C. rubella v1.1 2431   scaffold_1: 14982927-14985357

21 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29648.m001917 R. communis v0.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Thhalv10011594m E. salsugineum v1.0 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Lus10029749 L. usitatissimum v1.0 124238928 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Gorai.005G083500.1 G. raimondii v2.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Thecc1EG035364t1 T. cacao v1.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Araha.54171s0002.1.p A. halleri v1.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Potri.005G186700.1.p P. trichocarpa v3.1 124238928 sequence-specific DNA binding transcription factors 2 5268 Malvidae
orange1.1g042018m C. sinensis v1.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
AT1G43860.1 A. thaliana TAIR10 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Ciclev10001639m C. clementina v1.0 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Lus10042780 L. usitatissimum v1.0 124238928 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Cagra.2493s0001.1.p C. grandiflora v1.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Brara.E01759.1.p B. rapa FPsc v1.3 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Bostr.12302s0053.1.p B. stricta v1.2 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
SapurV1A.0261s0100.1.p S. purpurea v1.0 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Manes.02G173400.1.p M. esculenta v6.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
AL1G51980.t1 A. lyrata v2.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae
Potri.002G073200.1.p P. trichocarpa v3.1 124238928 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Podel.02G080200.1.p P. deltoides WV94 v2.1 124238928 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Podel.05G198300.1.p P. deltoides WV94 v2.1 124238928 sequence-specific DNA binding transcription factors 2 5268 Malvidae
Carub.0001s3480.1.p C. rubella v1.1 124238928 sequence-specific DNA binding transcription factors 1 5268 Malvidae